| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082437
Identifier: 99082437
GI number: 99082437
Start: 2735291
End: 2735620
Strand: Direct
Name: 99082437
Synonym: TM1040_2597
Alternate gene names: NA
Gene position: 2735291-2735620 (Clockwise)
Preceding gene: 99082429
Following gene: 99082440
Centisome position: 85.45
GC content: 59.39
Gene sequence:
>330_bases ATGAACGACACTCTTGATACAGTCTTTGCGGCCCTGGCAGATCCGACCCGGCGGGCGATCCTGTCGATGCTGCTCGAAGA CGATATGGCCGTCACCGATGTGGCCGAGCCTTTCGAGATGTCCTTGGCGGCGATTTCAAAGCATCTCACCATCCTCACCC GCGCGGGCCTCATTCAGCAGGAAAAACGCGGACGGGTGAAGTGGTGCAAGCTACAACCGGACGCCTTGCGGGCAGCCTCG GTCTGGATGCAGGGTTTTGGTCAGTTCGAGCCGGTGAACCTCGATGCATTCGAGCGCTTTCTCGAGGAAGAACTTCGCGA CGGCGAGTGA
Upstream 100 bases:
>100_bases TCTGCGCGCTCCTTAAATACGTCCGCAAACAATAGAGCGCCTTTGTGCGCACACGCTTCGGGATTGTCGACCCGCCTCTT GCGCTTTAGGAGGTATCGGT
Downstream 100 bases:
>100_bases GGGCCCGCAAACACCCTTCAGCCGAGCGAAGTCACACGTCGCCTATCCGTGCTCATCCTTCAACAGCAGCCAGAGCGCCA CGATGGTGAGGCCAATGCCA
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; ArsR Family Regulatory; Transcriptional Regulator ArsR Family Protein; Transcription Regulator ArsR; Transcriptional Regulator Arsr Family; ArsR Family Transcriptional Regulatory Protein; Arsenical Resistance Operon Repressor; Transcriptional Regulatory Protein; Transcriptional Regulatory ArsR Family; MarR Family Transcriptional Regulator; ArsR Family xin-Antitoxin System Antitoxin Component; Transcriptional Regulator Protein; Arsr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein ArsR Family; Xin-Antitoxin System Antitoxin Component ArsR Family; HTH Family Transcriptional Regulator
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MNDTLDTVFAALADPTRRAILSMLLEDDMAVTDVAEPFEMSLAAISKHLTILTRAGLIQQEKRGRVKWCKLQPDALRAAS VWMQGFGQFEPVNLDAFERFLEEELRDGE
Sequences:
>Translated_109_residues MNDTLDTVFAALADPTRRAILSMLLEDDMAVTDVAEPFEMSLAAISKHLTILTRAGLIQQEKRGRVKWCKLQPDALRAAS VWMQGFGQFEPVNLDAFERFLEEELRDGE >Mature_109_residues MNDTLDTVFAALADPTRRAILSMLLEDDMAVTDVAEPFEMSLAAISKHLTILTRAGLIQQEKRGRVKWCKLQPDALRAAS VWMQGFGQFEPVNLDAFERFLEEELRDGE
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12312; Mature: 12312
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTLDTVFAALADPTRRAILSMLLEDDMAVTDVAEPFEMSLAAISKHLTILTRAGLIQQ CCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH EKRGRVKWCKLQPDALRAASVWMQGFGQFEPVNLDAFERFLEEELRDGE HHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNDTLDTVFAALADPTRRAILSMLLEDDMAVTDVAEPFEMSLAAISKHLTILTRAGLIQQ CCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH EKRGRVKWCKLQPDALRAASVWMQGFGQFEPVNLDAFERFLEEELRDGE HHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA