Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082411

Identifier: 99082411

GI number: 99082411

Start: 2712865

End: 2713323

Strand: Direct

Name: 99082411

Synonym: TM1040_2571

Alternate gene names: NA

Gene position: 2712865-2713323 (Clockwise)

Preceding gene: 99082410

Following gene: 99082412

Centisome position: 84.75

GC content: 64.27

Gene sequence:

>459_bases
ATGTTTCGCGGCATTCCCGCAGCGCCGCTCGCGCTTGGCCTCGCTGGCCTCATTCCTTTTGTGTGGGGCGCCCTGACGCT
GCTGGTGCCTGCATTGCAGTCGTGGGGGATCAGCGCGCTTGGCCCACGCTTTGTCGGTCCCTATGTGCAGCTGTTTTACG
GCTCGGTGATCCTAAGCTTCATGTCCGGTGTGCTCTGGGGGTATGCCACGCGTGCCTCTGGCCGCCTGCAATCGGCGGCC
TGCTACGCGCTTTCGGTGATCCCGGCGCTCTGGGCCTTCTTTATGACCGGCGGCGGCCCCGTCAGCGCGGGACTCAACCT
GATCTGGGGCTTCCTCGGCCTGTTGCTCTTGGACATGATGTTCAGCCTGTGGCGCCTGACGCCCGCGTGGTGGGTTCGAC
TGCGCGTGCTGCTCACCGCTATTGTGGTCCTGAGCCTCAGCATCGGCGTCTTCCTATGA

Upstream 100 bases:

>100_bases
GCCTCATTCTTGGCTCCGAGCGCGTAGTGACATGGCTCAATCGCAGCTTTGCCGCCATCTTTGCAGCTCTCGCGCTGCGC
TTGGCAATGGAGCGCAGCTG

Downstream 100 bases:

>100_bases
GCGACAAGCAAACCATGGCGGTCTATGCAAAGGCCGCAGAAGACTACGCCAAGGGATTTGCCCGCACCAAGGACACCGTT
CACGATCGCGATTATGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MFRGIPAAPLALGLAGLIPFVWGALTLLVPALQSWGISALGPRFVGPYVQLFYGSVILSFMSGVLWGYATRASGRLQSAA
CYALSVIPALWAFFMTGGGPVSAGLNLIWGFLGLLLLDMMFSLWRLTPAWWVRLRVLLTAIVVLSLSIGVFL

Sequences:

>Translated_152_residues
MFRGIPAAPLALGLAGLIPFVWGALTLLVPALQSWGISALGPRFVGPYVQLFYGSVILSFMSGVLWGYATRASGRLQSAA
CYALSVIPALWAFFMTGGGPVSAGLNLIWGFLGLLLLDMMFSLWRLTPAWWVRLRVLLTAIVVLSLSIGVFL
>Mature_152_residues
MFRGIPAAPLALGLAGLIPFVWGALTLLVPALQSWGISALGPRFVGPYVQLFYGSVILSFMSGVLWGYATRASGRLQSAA
CYALSVIPALWAFFMTGGGPVSAGLNLIWGFLGLLLLDMMFSLWRLTPAWWVRLRVLLTAIVVLSLSIGVFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16347; Mature: 16347

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRGIPAAPLALGLAGLIPFVWGALTLLVPALQSWGISALGPRFVGPYVQLFYGSVILSF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHH
MSGVLWGYATRASGRLQSAACYALSVIPALWAFFMTGGGPVSAGLNLIWGFLGLLLLDMM
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FSLWRLTPAWWVRLRVLLTAIVVLSLSIGVFL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFRGIPAAPLALGLAGLIPFVWGALTLLVPALQSWGISALGPRFVGPYVQLFYGSVILSF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHH
MSGVLWGYATRASGRLQSAACYALSVIPALWAFFMTGGGPVSAGLNLIWGFLGLLLLDMM
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FSLWRLTPAWWVRLRVLLTAIVVLSLSIGVFL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA