Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082402

Identifier: 99082402

GI number: 99082402

Start: 2705013

End: 2705438

Strand: Reverse

Name: 99082402

Synonym: TM1040_2562

Alternate gene names: NA

Gene position: 2705438-2705013 (Counterclockwise)

Preceding gene: 99082403

Following gene: 99082401

Centisome position: 84.52

GC content: 59.15

Gene sequence:

>426_bases
GTGAAACTGGGTCGGTTTGCCATTGTCTACCTCGGGATCATGGTTGCCCTGATGGTGCTGATCTTGTTGGTGCAGGCGAT
TTTTCGCTTTGACATCTCGAATGCCGGGATGGCGATCATTCCGGCCATGGGGGCCGCGATGGTCGAGGGGCAAGCCTTTG
CCAAGGCGCAGGAGCGCATGCCCGAGCCTGCCGAGATGTGGGGCTTTGCCCGGCGCGCAGGGATTGTGATCCTGGGTCTG
ACGCTGCTGTCCACCGCCGCCTTCAGTATTGCGGTGCCAGAGATCAAACACATTCTTTCCCAACCTCAGGGCACCATGTT
CTTGCTGGTTGCGGTGCTGTTTCAGGCGATGATCTCCTTTCTGCTGGTCCGGTTCTTCTTGGCGACCGGCGCAAAGTCCA
TGCTGCGGGCACAGAAACGCCCATGA

Upstream 100 bases:

>100_bases
TCGGGCATTTTCTGATCGGCGAGGCGATTTTTCGCGGCCTTTCTCCCGCGATTGGTGAAATGCGCCGCCTGATGGATGCG
GCACGCTCTGGAGCTGACGC

Downstream 100 bases:

>100_bases
GCAGAGCGATCTGAGGGAAAGACCAAATGATTCTCGGCATCGGTACGGATCTGGCAAATATCGAACGCATCCAAGGCGTG
TTGGATCGGTTTGGCGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKLGRFAIVYLGIMVALMVLILLVQAIFRFDISNAGMAIIPAMGAAMVEGQAFAKAQERMPEPAEMWGFARRAGIVILGL
TLLSTAAFSIAVPEIKHILSQPQGTMFLLVAVLFQAMISFLLVRFFLATGAKSMLRAQKRP

Sequences:

>Translated_141_residues
MKLGRFAIVYLGIMVALMVLILLVQAIFRFDISNAGMAIIPAMGAAMVEGQAFAKAQERMPEPAEMWGFARRAGIVILGL
TLLSTAAFSIAVPEIKHILSQPQGTMFLLVAVLFQAMISFLLVRFFLATGAKSMLRAQKRP
>Mature_141_residues
MKLGRFAIVYLGIMVALMVLILLVQAIFRFDISNAGMAIIPAMGAAMVEGQAFAKAQERMPEPAEMWGFARRAGIVILGL
TLLSTAAFSIAVPEIKHILSQPQGTMFLLVAVLFQAMISFLLVRFFLATGAKSMLRAQKRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15372; Mature: 15372

Theoretical pI: Translated: 11.55; Mature: 11.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGRFAIVYLGIMVALMVLILLVQAIFRFDISNAGMAIIPAMGAAMVEGQAFAKAQERM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PEPAEMWGFARRAGIVILGLTLLSTAAFSIAVPEIKHILSQPQGTMFLLVAVLFQAMISF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLVRFFLATGAKSMLRAQKRP
HHHHHHHHHCHHHHHHHCCCC
>Mature Secondary Structure
MKLGRFAIVYLGIMVALMVLILLVQAIFRFDISNAGMAIIPAMGAAMVEGQAFAKAQERM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PEPAEMWGFARRAGIVILGLTLLSTAAFSIAVPEIKHILSQPQGTMFLLVAVLFQAMISF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLVRFFLATGAKSMLRAQKRP
HHHHHHHHHCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA