| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082377
Identifier: 99082377
GI number: 99082377
Start: 2677985
End: 2678143
Strand: Reverse
Name: 99082377
Synonym: TM1040_2537
Alternate gene names: NA
Gene position: 2678143-2677985 (Counterclockwise)
Preceding gene: 99082378
Following gene: 99082374
Centisome position: 83.67
GC content: 53.46
Gene sequence:
>159_bases ATGACTGTTTTGTCTTATCTGATCCCAATTTCCCTTATCCTCGGCGGGGCAGGGTTGATTGGGTTCATCTATACGGTGCG CTCGGAGCAATATGACGACCCGGAAGGGGATGCGCGCCGTATCCTGAGTGACGAGTGGGATGATCACCCCAAACCTTGA
Upstream 100 bases:
>100_bases CCTGGCCACCCCCTTGATCGCGGCGCTGGCGATGTCCACGTCATCCATAACTGTTTCACTCAACGCCTTGCGTCTGCGTT AGAAAGCCGGGAGTGCCGTC
Downstream 100 bases:
>100_bases TGGCGCGACCTCATTGAGGGGGCTCAAACCGGTCAGATACCATATTGGTCGTCAGGTTTTACAAGGCCCACTGGCAGGGG GCGCTGCCCCCTCTTGCCCG
Product: cytochrome oxidase maturation protein, cbb3-type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 51
Protein sequence:
>52_residues MTVLSYLIPISLILGGAGLIGFIYTVRSEQYDDPEGDARRILSDEWDDHPKP
Sequences:
>Translated_52_residues MTVLSYLIPISLILGGAGLIGFIYTVRSEQYDDPEGDARRILSDEWDDHPKP >Mature_51_residues TVLSYLIPISLILGGAGLIGFIYTVRSEQYDDPEGDARRILSDEWDDHPKP
Specific function: Unknown
COG id: COG3197
COG function: function code P; Uncharacterized protein, possibly involved in nitrogen fixation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5835; Mature: 5703
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLSYLIPISLILGGAGLIGFIYTVRSEQYDDPEGDARRILSDEWDDHPKP CCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure TVLSYLIPISLILGGAGLIGFIYTVRSEQYDDPEGDARRILSDEWDDHPKP CHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA