Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082355

Identifier: 99082355

GI number: 99082355

Start: 2655018

End: 2655239

Strand: Reverse

Name: 99082355

Synonym: TM1040_2515

Alternate gene names: NA

Gene position: 2655239-2655018 (Counterclockwise)

Preceding gene: 99082356

Following gene: 99082354

Centisome position: 82.95

GC content: 58.56

Gene sequence:

>222_bases
ATGGACACGGACCTGTTATTGGTGACTGGGCTGATACTCGCCTGGCTTGGTGTGCCTGCCTTCTTTGCAGCCTATGCCCA
TCGCCGCAGCCCGATAACGGCTGCGGCGATGCTGATTCTAGGGGGTGGCTGCATCGCTTGGGCAGTGCTGAACCACCCGG
GTGGGTATAGCCTCGCTGATGTTCCGGATGTCTTTTTTCGGGTGATCGGGCGCTTTCTATGA

Upstream 100 bases:

>100_bases
CACCAATATCTTGCGCATTGCGCCTTGTGATGAACGCCTGATTTACAATACCGACCCGGAATAATACCCTTTCCCCCGTA
TGTATTAGGGGGTGAGGCGT

Downstream 100 bases:

>100_bases
TCAAAACCGCTTGCCCTTTGTGAGTGGCTGACGTAAAGGGCAGCCCTGTTCGCGCGACCGGCCAGTGTGGCATGCCGAGT
CGCGTGTGTAGCGAACCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MDTDLLLVTGLILAWLGVPAFFAAYAHRRSPITAAAMLILGGGCIAWAVLNHPGGYSLADVPDVFFRVIGRFL

Sequences:

>Translated_73_residues
MDTDLLLVTGLILAWLGVPAFFAAYAHRRSPITAAAMLILGGGCIAWAVLNHPGGYSLADVPDVFFRVIGRFL
>Mature_73_residues
MDTDLLLVTGLILAWLGVPAFFAAYAHRRSPITAAAMLILGGGCIAWAVLNHPGGYSLADVPDVFFRVIGRFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7801; Mature: 7801

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTDLLLVTGLILAWLGVPAFFAAYAHRRSPITAAAMLILGGGCIAWAVLNHPGGYSLAD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCH
VPDVFFRVIGRFL
HHHHHHHHHHHHC
>Mature Secondary Structure
MDTDLLLVTGLILAWLGVPAFFAAYAHRRSPITAAAMLILGGGCIAWAVLNHPGGYSLAD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCH
VPDVFFRVIGRFL
HHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA