Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is rpmI [H]

Identifier: 99082354

GI number: 99082354

Start: 2654701

End: 2654901

Strand: Reverse

Name: rpmI [H]

Synonym: TM1040_2514

Alternate gene names: 99082354

Gene position: 2654901-2654701 (Counterclockwise)

Preceding gene: 99082355

Following gene: 99082353

Centisome position: 82.94

GC content: 55.72

Gene sequence:

>201_bases
ATGCCCAAGATGAAGACAAAATCGAGCGCCAAAAAGCGCTTTAAAGTGACCGCGACCGGCAAGGTCATGGCTGGTCAGGC
CGGCAAGCGCCACGGCATGATCAAACGTCACAAGAAATTTATCCGTGATGCACGCGGAACCACCACCCTGTCCGCACCGG
ACGCAAAGATCGTCAAGGGCTTCATGCCCTACGACCGCTAA

Upstream 100 bases:

>100_bases
TTTGTGAGTGGCTGACGTAAAGGGCAGCCCTGTTCGCGCGACCGGCCAGTGTGGCATGCCGAGTCGCGTGTGTAGCGAAC
CTACGAATAAGGAGACGGAA

Downstream 100 bases:

>100_bases
GAGGAGATCTGAGATATGTCCCGCGTTAAAGGTGGTACCGTCACTCACGCCCGTCATAAGAAGGTCATCAAGGCAGCCAA
AGGTTACTACGGCCGTCGCA

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MPKMKTKSSAKKRFKVTATGKVMAGQAGKRHGMIKRHKKFIRDARGTTTLSAPDAKIVKGFMPYDR

Sequences:

>Translated_66_residues
MPKMKTKSSAKKRFKVTATGKVMAGQAGKRHGMIKRHKKFIRDARGTTTLSAPDAKIVKGFMPYDR
>Mature_65_residues
PKMKTKSSAKKRFKVTATGKVMAGQAGKRHGMIKRHKKFIRDARGTTTLSAPDAKIVKGFMPYDR

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706 [H]

Pfam domain/function: PF01632 Ribosomal_L35p [H]

EC number: NA

Molecular weight: Translated: 7379; Mature: 7248

Theoretical pI: Translated: 12.08; Mature: 12.08

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.6 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKMKTKSSAKKRFKVTATGKVMAGQAGKRHGMIKRHKKFIRDARGTTTLSAPDAKIVKG
CCCCCCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHC
FMPYDR
CCCCCC
>Mature Secondary Structure 
PKMKTKSSAKKRFKVTATGKVMAGQAGKRHGMIKRHKKFIRDARGTTTLSAPDAKIVKG
CCCCCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHC
FMPYDR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA