Click here to switch to the map view.

The map label for this gene is yiiP [C]

Identifier: 99082286

GI number: 99082286

Start: 2587609

End: 2588523

Strand: Direct

Name: yiiP [C]

Synonym: TM1040_2446

Alternate gene names: 99082286

Gene position: 2587609-2588523 (Clockwise)

Preceding gene: 99082285

Following gene: 99082291

Centisome position: 80.84

GC content: 59.23

Gene sequence:

>915_bases
ATGCCCTTTGGCCTCAATACCCGGCTGACAGCCAGTCAGATCGCAAGCGGGACCATTGTGGTATCCGTTGTGGTCCTGCT
GCTCAAGCTCGGGGCTTGGGCCATGACCGGATCGGTCGCATTGTTCTCTGATGCGATGGAGAGTCTCGTCAATGTCTCGG
CGGCGGTGCTTGCGTGGTTTGCGATCCGCTATGCCCAGCGCCCCGCCGATGACGGACACCCGTTTGGACATCACAAGGCC
GAGTATTTCTCTGCCGTGATCGAAGGGATCATGATCATTCTCGCCGCGGTTCTGATTTTGCATCAGGCCTTTGCCACATT
GACCGCGGGCACCCGGGCAGATCTCTCGGCGATTGGACTGGGCGTCAATGGCATCGCGCTGGTCATCAACCTGGTCTGGG
CGCAGGTCCTGCTGCGGGCCGGCAAACGCGTAAACTCGCCTGCATTTGCGGCCGGTGGCCGCCACCTGATGGGCGACGTG
TGGACCTCTGCCGGAGTGATGGTTGGGCTTTTGTTGGTGCTGGCGACGGGATGGCACATTCTTGACCCAATTCTTGCGCT
GCTGGTTGCGGTCAACATCCTGCGAGAAGGGCTGCATGTGGTCTCTGACTCTATCGATGGGCTGATGGACAAAGCCGCCT
CACCTGATGAGCAAGAGAAAATAGCCTCGGTTATTCTTGGTTCCGGTGGCGGTGCGCTTCAGATCCATGACATCAAGACC
CGGCGCGCGGGCAAAGCCATATTTGTCGAGTTTCACATGGTTGTGGATGGCGAAATGTCGGTCGCTGAAAGCCATGACAT
CTGTGACCGCCTTGAAGCAGAGATCGAAGCCGCCCTGCCCGGCGTTCATGTAACCATCCATGTCGAGCCGGATAACAAGC
TCGAGGCGGACGGCATCGAGCCGCCCGCGCTCTGA

Upstream 100 bases:

>100_bases
CAGGATCGGATCGACCAGAAGACATTCCGCCGCGCCACCTTGTTTGTGCTGCTGATCGCGGGTCTCAACCTGCTGCGCCG
CGCCTGGGTGGGCTGAGGCG

Downstream 100 bases:

>100_bases
CGCCCCTTGCTGTGGGGCAACTGGCGTCGCCCCGCACCTTCTCAGGCGCGCGTCGCCAAGGCGCGCAGCCCGGTCATCAG
GGCCAGAAGGGTTTTGGTGT

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MPFGLNTRLTASQIASGTIVVSVVVLLLKLGAWAMTGSVALFSDAMESLVNVSAAVLAWFAIRYAQRPADDGHPFGHHKA
EYFSAVIEGIMIILAAVLILHQAFATLTAGTRADLSAIGLGVNGIALVINLVWAQVLLRAGKRVNSPAFAAGGRHLMGDV
WTSAGVMVGLLLVLATGWHILDPILALLVAVNILREGLHVVSDSIDGLMDKAASPDEQEKIASVILGSGGGALQIHDIKT
RRAGKAIFVEFHMVVDGEMSVAESHDICDRLEAEIEAALPGVHVTIHVEPDNKLEADGIEPPAL

Sequences:

>Translated_304_residues
MPFGLNTRLTASQIASGTIVVSVVVLLLKLGAWAMTGSVALFSDAMESLVNVSAAVLAWFAIRYAQRPADDGHPFGHHKA
EYFSAVIEGIMIILAAVLILHQAFATLTAGTRADLSAIGLGVNGIALVINLVWAQVLLRAGKRVNSPAFAAGGRHLMGDV
WTSAGVMVGLLLVLATGWHILDPILALLVAVNILREGLHVVSDSIDGLMDKAASPDEQEKIASVILGSGGGALQIHDIKT
RRAGKAIFVEFHMVVDGEMSVAESHDICDRLEAEIEAALPGVHVTIHVEPDNKLEADGIEPPAL
>Mature_303_residues
PFGLNTRLTASQIASGTIVVSVVVLLLKLGAWAMTGSVALFSDAMESLVNVSAAVLAWFAIRYAQRPADDGHPFGHHKAE
YFSAVIEGIMIILAAVLILHQAFATLTAGTRADLSAIGLGVNGIALVINLVWAQVLLRAGKRVNSPAFAAGGRHLMGDVW
TSAGVMVGLLLVLATGWHILDPILALLVAVNILREGLHVVSDSIDGLMDKAASPDEQEKIASVILGSGGGALQIHDIKTR
RAGKAIFVEFHMVVDGEMSVAESHDICDRLEAEIEAALPGVHVTIHVEPDNKLEADGIEPPAL

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=275, Percent_Identity=29.0909090909091, Blast_Score=135, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI115533508, Length=289, Percent_Identity=21.7993079584775, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115533506, Length=289, Percent_Identity=21.7993079584775, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI193210990, Length=302, Percent_Identity=22.5165562913907, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 31999; Mature: 31867

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFGLNTRLTASQIASGTIVVSVVVLLLKLGAWAMTGSVALFSDAMESLVNVSAAVLAWF
CCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AIRYAQRPADDGHPFGHHKAEYFSAVIEGIMIILAAVLILHQAFATLTAGTRADLSAIGL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
GVNGIALVINLVWAQVLLRAGKRVNSPAFAAGGRHLMGDVWTSAGVMVGLLLVLATGWHI
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
LDPILALLVAVNILREGLHVVSDSIDGLMDKAASPDEQEKIASVILGSGGGALQIHDIKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECHH
RRAGKAIFVEFHMVVDGEMSVAESHDICDRLEAEIEAALPGVHVTIHVEPDNKLEADGIE
CCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
PPAL
CCCC
>Mature Secondary Structure 
PFGLNTRLTASQIASGTIVVSVVVLLLKLGAWAMTGSVALFSDAMESLVNVSAAVLAWF
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AIRYAQRPADDGHPFGHHKAEYFSAVIEGIMIILAAVLILHQAFATLTAGTRADLSAIGL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
GVNGIALVINLVWAQVLLRAGKRVNSPAFAAGGRHLMGDVWTSAGVMVGLLLVLATGWHI
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
LDPILALLVAVNILREGLHVVSDSIDGLMDKAASPDEQEKIASVILGSGGGALQIHDIKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECHH
RRAGKAIFVEFHMVVDGEMSVAESHDICDRLEAEIEAALPGVHVTIHVEPDNKLEADGIE
CCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
PPAL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]