| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is yhbS [C]
Identifier: 99082158
GI number: 99082158
Start: 2439184
End: 2439684
Strand: Reverse
Name: yhbS [C]
Synonym: TM1040_2318
Alternate gene names: 99082158
Gene position: 2439684-2439184 (Counterclockwise)
Preceding gene: 99082161
Following gene: 99082157
Centisome position: 76.22
GC content: 64.67
Gene sequence:
>501_bases GTGATCACCATCGCGCCAGAGACGCCAGAGGATTCCTGGGAAGTCGAAGCCCTTTACGACCTGTGTTTTGCACCGGGGCG GACGGCTTTGTCCTCCTATCGGCTGCGGGATGGGGTGGCGCCGGTACAGAGGCTCAGCCAGGTTGCACGCGACAGTGATG GTATTCTGGCGGGCGCAATCCGGTTCTGGCCCGTTCACGTGGGCACGCAGGACGCGCTGTTGTTGGGTCCGGTGGCGGTG CACCCGACGCGACAGGGCGAGGGCATTGGTGCCGCACTCATCCGCGACAGTCTGTGGAAAGCGGAAGACAGCCATTGGCA ACGGGTGATCCTTGTGGGGGATGCGCCCTATTATCAGCGATTTGGGTTTGAGCGCTTGGACGGTGTTGAAATGCCACCGC CCACCAATCCCGAACGTGTACTGGGACTCGCACTCAACCCGGGGGCCTGGGGGGGCGTGCGCGGGCAGGTGACGCGCTGG AGCGGTGCGGCGCAGGGGTGA
Upstream 100 bases:
>100_bases CCAAGTGTTTGCCCCAGACTTACGCTCGTGCTAGGGCGAAATCCACCCCCGCGTCGCGTTGGCTCTGGTCACAAGGCGCA GCCGTTGGAGCCAAAGACTC
Downstream 100 bases:
>100_bases CAGTCTCCCCGGTTGCGACGGCATAGGTCTTGAAACCAGAGCGCGGACTCCTGATCTCATACAAAGAAGCAACAGAGATG AGGTCATGCATGGGCGAATT
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Gnat Family; Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; Acetyltransferase Protein; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family Protein; Acetyltransferase Family Protein; Gcn5-Related N-Acetyltransferase; Acetyltransferase-Like
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MITIAPETPEDSWEVEALYDLCFAPGRTALSSYRLRDGVAPVQRLSQVARDSDGILAGAIRFWPVHVGTQDALLLGPVAV HPTRQGEGIGAALIRDSLWKAEDSHWQRVILVGDAPYYQRFGFERLDGVEMPPPTNPERVLGLALNPGAWGGVRGQVTRW SGAAQG
Sequences:
>Translated_166_residues MITIAPETPEDSWEVEALYDLCFAPGRTALSSYRLRDGVAPVQRLSQVARDSDGILAGAIRFWPVHVGTQDALLLGPVAV HPTRQGEGIGAALIRDSLWKAEDSHWQRVILVGDAPYYQRFGFERLDGVEMPPPTNPERVLGLALNPGAWGGVRGQVTRW SGAAQG >Mature_166_residues MITIAPETPEDSWEVEALYDLCFAPGRTALSSYRLRDGVAPVQRLSQVARDSDGILAGAIRFWPVHVGTQDALLLGPVAV HPTRQGEGIGAALIRDSLWKAEDSHWQRVILVGDAPYYQRFGFERLDGVEMPPPTNPERVLGLALNPGAWGGVRGQVTRW SGAAQG
Specific function: Unknown
COG id: COG3153
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 18056; Mature: 18056
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITIAPETPEDSWEVEALYDLCFAPGRTALSSYRLRDGVAPVQRLSQVARDSDGILAGAI CEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEE RFWPVHVGTQDALLLGPVAVHPTRQGEGIGAALIRDSLWKAEDSHWQRVILVGDAPYYQR EEEEEECCCCCCEEECCEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHH FGFERLDGVEMPPPTNPERVLGLALNPGAWGGVRGQVTRWSGAAQG CCCHHCCCCCCCCCCCHHHEEEEEECCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure MITIAPETPEDSWEVEALYDLCFAPGRTALSSYRLRDGVAPVQRLSQVARDSDGILAGAI CEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEE RFWPVHVGTQDALLLGPVAVHPTRQGEGIGAALIRDSLWKAEDSHWQRVILVGDAPYYQR EEEEEECCCCCCEEECCEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHH FGFERLDGVEMPPPTNPERVLGLALNPGAWGGVRGQVTRWSGAAQG CCCHHCCCCCCCCCCCHHHEEEEEECCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA