Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082151

Identifier: 99082151

GI number: 99082151

Start: 2432547

End: 2433074

Strand: Reverse

Name: 99082151

Synonym: TM1040_2311

Alternate gene names: NA

Gene position: 2433074-2432547 (Counterclockwise)

Preceding gene: 99082152

Following gene: 99082150

Centisome position: 76.01

GC content: 61.17

Gene sequence:

>528_bases
ATGACCGGCAAGATCCTGTCGATCATCCTCATCGTCTCTGGCCTCGTGGCCGGGATCGCGATGTATTATCTGCAAGTCTA
CGGCTTTTACGACGAGGTTGTCGCAGAGCCCGGTCGCGATGTGGTGCTCATGCCTATCGGGGGCGAGGCGCCGCAGGCCA
TCGCCTATAGCGATTTTAAGGCCATCGACGCGGACAGCTCGCCCATTCGCTACCGCGCCTGTTTTGCAACGCCTCTGAAA
CCCGCCGAGCTGGCGCAGCTCTATGAGCTTTCCGAGGCGCGCGATCCGCGCAATGCGCCGGAGTGGTTCGACTGCTTTGA
CGCTGCCGCCATCGGCGCGGCCCTCAAGGACGGGCGCGCGCGGGCGTTTATCTCTGAAAAGAACATCGAATTTGGTGTCG
ATCGTATCGTGGCTGTCACCGAGGATGGCCGAGGCTACGTCTGGCACGAACTGAACAACTGTGGCGAGAAGGCCTATGAC
GGCACCATCGTGGGCGAGGAATGCCCCAAGCGGCCGCAAAGCAACTGA

Upstream 100 bases:

>100_bases
AAGCAATGCGCCGATGCCTTTGTGCTGACCGAGGCGGGAGGTCACACCGAAGAGACCGCAGGCGAAACAGCCGCCTGAGC
CGCGCAAAGGAGCATCTGAC

Downstream 100 bases:

>100_bases
TCCGGCGCAGCTCTGCCTGTCGCCACATCCCTTTATCGCCGTGAGCGCACGGCAGACCGAACCGTTGAGGACACGTCATG
GCTGATCTTCTGATCGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MTGKILSIILIVSGLVAGIAMYYLQVYGFYDEVVAEPGRDVVLMPIGGEAPQAIAYSDFKAIDADSSPIRYRACFATPLK
PAELAQLYELSEARDPRNAPEWFDCFDAAAIGAALKDGRARAFISEKNIEFGVDRIVAVTEDGRGYVWHELNNCGEKAYD
GTIVGEECPKRPQSN

Sequences:

>Translated_175_residues
MTGKILSIILIVSGLVAGIAMYYLQVYGFYDEVVAEPGRDVVLMPIGGEAPQAIAYSDFKAIDADSSPIRYRACFATPLK
PAELAQLYELSEARDPRNAPEWFDCFDAAAIGAALKDGRARAFISEKNIEFGVDRIVAVTEDGRGYVWHELNNCGEKAYD
GTIVGEECPKRPQSN
>Mature_174_residues
TGKILSIILIVSGLVAGIAMYYLQVYGFYDEVVAEPGRDVVLMPIGGEAPQAIAYSDFKAIDADSSPIRYRACFATPLKP
AELAQLYELSEARDPRNAPEWFDCFDAAAIGAALKDGRARAFISEKNIEFGVDRIVAVTEDGRGYVWHELNNCGEKAYDG
TIVGEECPKRPQSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19145; Mature: 19014

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGKILSIILIVSGLVAGIAMYYLQVYGFYDEVVAEPGRDVVLMPIGGEAPQAIAYSDFK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCE
AIDADSSPIRYRACFATPLKPAELAQLYELSEARDPRNAPEWFDCFDAAAIGAALKDGRA
EECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCE
RAFISEKNIEFGVDRIVAVTEDGRGYVWHELNNCGEKAYDGTIVGEECPKRPQSN
EEEEECCCCCCCCCEEEEEEECCCEEEEHHHHCCCCHHCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
TGKILSIILIVSGLVAGIAMYYLQVYGFYDEVVAEPGRDVVLMPIGGEAPQAIAYSDFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCE
AIDADSSPIRYRACFATPLKPAELAQLYELSEARDPRNAPEWFDCFDAAAIGAALKDGRA
EECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCE
RAFISEKNIEFGVDRIVAVTEDGRGYVWHELNNCGEKAYDGTIVGEECPKRPQSN
EEEEECCCCCCCCCEEEEEEECCCEEEEHHHHCCCCHHCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA