| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is glmM
Identifier: 99082145
GI number: 99082145
Start: 2423398
End: 2424741
Strand: Reverse
Name: glmM
Synonym: TM1040_2305
Alternate gene names: 99082145
Gene position: 2424741-2423398 (Counterclockwise)
Preceding gene: 99082146
Following gene: 99082142
Centisome position: 75.75
GC content: 63.32
Gene sequence:
>1344_bases ATGCGGAAACTCTTTGGAACCGATGGCGTGCGTGGCAAGGCCAATATGCATCCGATGACCGCCGAGATGGCGCTTCGGAT CGGGGCCGCTGTTGGGCGCTACTTCCGGCGTGAAAACGACACCGTGCACCGGGTGGTGATCGGCAAGGACACCCGCCTCT CGGGCTATATGTTTGAAAACGCGCTGACGGCGGGGCTGACCTCGACAGGCATGAATGTGCTTTTGCTGGGGCCCGTGCCA ACGCCTGCCGTGGGTCTGATGACCCGCTCGATGCGGGCAGATTTGGGCGTGATGATCTCTGCCAGCCACAACCCGGCCGA GGACAATGGCATCAAGTTCTTTGGCCCCGATGGCTATAAGCTCTCGGATGAGGTGGAACTGGAGCTTGAGGCGCTGATTG AGGCGGGTGTCGAGCCTGCACAGGCGCAGAACATTGGTCGCGCCAAACGGATCGATGATGCACGGTTTCGCTATGGCGAG CGGGTCAAGAGCTCTTTGCCGCGTGACATGCGTCTGGATGGCCTGAAGGTTGTGATCGATTGCGCGAATGGGGCCGCCCA CCGCGCCGCGCCTGAAATCCTGTGGGAGCTGGGTGCAGATGTGATCCCCGTCGGGGTGTCGCCCGATGGGCTCAATATCA ATCGCGGCTGTGGCTCCACCCAGCCGGCGGCGGCGGCCGAGACGGTGGTGGCGCATGGTGCCGATGTGGGGATCTGCCTT GACGGTGATGCCGACAGGGTTGTGGTGATCGACGAGACCGGCACCGTCGCCGACGGCGATCAGCTGATGGCGCTTCTGGC CTCGGCATGGTCTGCGGATGGGCGGTTGAGCGGCGGCGCACTTGTTGCAACCGTCATGTCGAACCTGGGTCTCGAGCGGT TCTTGAATGAGCGCGGCATCGGTCTTGAGCGGACCGGCGTTGGGGACCGCTATGTGGTGGAGCGCATGCGGCAGGGGGGC TTTAACCTCGGCGGTGAGCAATCCGGCCATATCGTGATGAGCGATTATGCCACCACCGGCGACGGTCTGATGGCGGGGCT GCATTTCCTCGCCGAGATGGTACGGCGCGGGCAGAAGGCCTCGGAATTGGCGCGCCAGTTTGAGCCGGTTCCGCAGCTGC TCAAGAATGTGCGGTTCGAGGCCGGGCAGGCACCATTGGAGGCGGATCAGGTGCAAACGGCGATTGCAGAGGCTGAAAAG CAGCTCAATGGCCGCGGGCGGCTGTTGATCCGAAAGTCTGGCACCGAGCCGCTCATCCGCGTGATGGCCGAGAGCGAGGA CCCGGTGTTGCTGAACCGTGCTGTCGACGATGTGGTTGCGGCTGTAGAGGCGGCAACGCAGTAG
Upstream 100 bases:
>100_bases GACGGCGCAGGCGCTGCGCCTGTGGCAGGCCACACGATAGAAAGAGATCACGGCAGCAGTTGGAATGTCCGGCGCTGCGC TGGGCAGGGGAGCAGCTTTG
Downstream 100 bases:
>100_bases GCACATGCGGCCCGGGCTTACGGTCGGCGGCGCAGGGTTTGCTTTGGTCCCTTCATGGGGGGCTCTGTCTCCACAGGCAG AGTCGTCACCCCGAGATCTT
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MRKLFGTDGVRGKANMHPMTAEMALRIGAAVGRYFRRENDTVHRVVIGKDTRLSGYMFENALTAGLTSTGMNVLLLGPVP TPAVGLMTRSMRADLGVMISASHNPAEDNGIKFFGPDGYKLSDEVELELEALIEAGVEPAQAQNIGRAKRIDDARFRYGE RVKSSLPRDMRLDGLKVVIDCANGAAHRAAPEILWELGADVIPVGVSPDGLNINRGCGSTQPAAAAETVVAHGADVGICL DGDADRVVVIDETGTVADGDQLMALLASAWSADGRLSGGALVATVMSNLGLERFLNERGIGLERTGVGDRYVVERMRQGG FNLGGEQSGHIVMSDYATTGDGLMAGLHFLAEMVRRGQKASELARQFEPVPQLLKNVRFEAGQAPLEADQVQTAIAEAEK QLNGRGRLLIRKSGTEPLIRVMAESEDPVLLNRAVDDVVAAVEAATQ
Sequences:
>Translated_447_residues MRKLFGTDGVRGKANMHPMTAEMALRIGAAVGRYFRRENDTVHRVVIGKDTRLSGYMFENALTAGLTSTGMNVLLLGPVP TPAVGLMTRSMRADLGVMISASHNPAEDNGIKFFGPDGYKLSDEVELELEALIEAGVEPAQAQNIGRAKRIDDARFRYGE RVKSSLPRDMRLDGLKVVIDCANGAAHRAAPEILWELGADVIPVGVSPDGLNINRGCGSTQPAAAAETVVAHGADVGICL DGDADRVVVIDETGTVADGDQLMALLASAWSADGRLSGGALVATVMSNLGLERFLNERGIGLERTGVGDRYVVERMRQGG FNLGGEQSGHIVMSDYATTGDGLMAGLHFLAEMVRRGQKASELARQFEPVPQLLKNVRFEAGQAPLEADQVQTAIAEAEK QLNGRGRLLIRKSGTEPLIRVMAESEDPVLLNRAVDDVVAAVEAATQ >Mature_447_residues MRKLFGTDGVRGKANMHPMTAEMALRIGAAVGRYFRRENDTVHRVVIGKDTRLSGYMFENALTAGLTSTGMNVLLLGPVP TPAVGLMTRSMRADLGVMISASHNPAEDNGIKFFGPDGYKLSDEVELELEALIEAGVEPAQAQNIGRAKRIDDARFRYGE RVKSSLPRDMRLDGLKVVIDCANGAAHRAAPEILWELGADVIPVGVSPDGLNINRGCGSTQPAAAAETVVAHGADVGICL DGDADRVVVIDETGTVADGDQLMALLASAWSADGRLSGGALVATVMSNLGLERFLNERGIGLERTGVGDRYVVERMRQGG FNLGGEQSGHIVMSDYATTGDGLMAGLHFLAEMVRRGQKASELARQFEPVPQLLKNVRFEAGQAPLEADQVQTAIAEAEK QLNGRGRLLIRKSGTEPLIRVMAESEDPVLLNRAVDDVVAAVEAATQ
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=444, Percent_Identity=47.7477477477478, Blast_Score=392, Evalue=1e-110, Organism=Escherichia coli, GI1788361, Length=470, Percent_Identity=28.936170212766, Blast_Score=124, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323934, Length=144, Percent_Identity=30.5555555555556, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_SILST (Q1GE79)
Other databases:
- EMBL: CP000377 - RefSeq: YP_614299.1 - ProteinModelPortal: Q1GE79 - SMR: Q1GE79 - STRING: Q1GE79 - GeneID: 4078295 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_2305 - NMPDR: fig|292414.1.peg.667 - eggNOG: COG1109 - HOGENOM: HBG644964 - OMA: EEAGINS - PhylomeDB: Q1GE79 - ProtClustDB: PRK14315 - BioCyc: SSP292414:TM1040_2305-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 47666; Mature: 47666
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 102-102
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLFGTDGVRGKANMHPMTAEMALRIGAAVGRYFRRENDTVHRVVIGKDTRLSGYMFEN CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH ALTAGLTSTGMNVLLLGPVPTPAVGLMTRSMRADLGVMISASHNPAEDNGIKFFGPDGYK HHHHCHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCC LSDEVELELEALIEAGVEPAQAQNIGRAKRIDDARFRYGERVKSSLPRDMRLDGLKVVID CCCHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEE CANGAAHRAAPEILWELGADVIPVGVSPDGLNINRGCGSTQPAAAAETVVAHGADVGICL CCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEE DGDADRVVVIDETGTVADGDQLMALLASAWSADGRLSGGALVATVMSNLGLERFLNERGI CCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHCCC GLERTGVGDRYVVERMRQGGFNLGGEQSGHIVMSDYATTGDGLMAGLHFLAEMVRRGQKA CEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCHH SELARQFEPVPQLLKNVRFEAGQAPLEADQVQTAIAEAEKQLNGRGRLLIRKSGTEPLIR HHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH VMAESEDPVLLNRAVDDVVAAVEAATQ HHHCCCCCEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKLFGTDGVRGKANMHPMTAEMALRIGAAVGRYFRRENDTVHRVVIGKDTRLSGYMFEN CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH ALTAGLTSTGMNVLLLGPVPTPAVGLMTRSMRADLGVMISASHNPAEDNGIKFFGPDGYK HHHHCHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCC LSDEVELELEALIEAGVEPAQAQNIGRAKRIDDARFRYGERVKSSLPRDMRLDGLKVVID CCCHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEE CANGAAHRAAPEILWELGADVIPVGVSPDGLNINRGCGSTQPAAAAETVVAHGADVGICL CCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEE DGDADRVVVIDETGTVADGDQLMALLASAWSADGRLSGGALVATVMSNLGLERFLNERGI CCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHCCC GLERTGVGDRYVVERMRQGGFNLGGEQSGHIVMSDYATTGDGLMAGLHFLAEMVRRGQKA CEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCHH SELARQFEPVPQLLKNVRFEAGQAPLEADQVQTAIAEAEKQLNGRGRLLIRKSGTEPLIR HHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH VMAESEDPVLLNRAVDDVVAAVEAATQ HHHCCCCCEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA