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The map label for this gene is cyoA [H]

Identifier: 99082124

GI number: 99082124

Start: 2403547

End: 2404638

Strand: Direct

Name: cyoA [H]

Synonym: TM1040_2284

Alternate gene names: 99082124

Gene position: 2403547-2404638 (Clockwise)

Preceding gene: 99082122

Following gene: 99082125

Centisome position: 75.09

GC content: 58.52

Gene sequence:

>1092_bases
ATGCGGTATCTTCGTTTCCTGTGTTGTGCTTTGGCGTTTTTGACGCTGTCGGGCTGCAATCTCGTATTGCTGTCCCCCTC
CGGCGACATCGCCGCGCAGCAGGGCGACCTCATCGTTTACTCCACAGTCCTCATGCTCATCGTCATCATTCCTGTGATGG
CGCTGACGGTGTTTTTTGCCTTCAAATACCGGGCAGAAAATAAGGACGCCCGGTACGAGCCGGACTGGGATCACTCCGTC
AGTCTCGAGATCGTGGTGTGGTTTGTGCCGCTTGCGATCATCATCTGTCTGGCAGGGCTGACCTGGGTGGCGACCCACCG
GCTGGAGCCCTATGACGATCTGCGCCGCGTCTCCGAGACCAAGCCCATCGACCCCAATGTGGAACCCATGGAGGTTCAGG
TGGTGGCGCTCGATTGGAAATGGCTGTTCATCTATCCCGAATACGGCGTGGCAACCGTCAACGAGGCTGCAGCCATCGTG
GATCGCCCGGTGGAGTGGAAACTCACGTCCTCTACGGTGATGAACGCCTTCTACATCCCGGAAATGGCCGGGATGATCTA
TGCGATGGCCGGGATGGAGACCGAGCTCAACGCGGTGATCAACGAACCCGGCACGTTTGAGGGTTTTTCGGCCAACTACA
GCGGCAATGGGTTCTCTCACATGCGGTTTGATTTCATCGCCGAGGATGAAGCGGGCTTTGAGGCCTGGATCGAAGAGGTC
CGTGCAAGCGGCATGACGCTTGATCAGGACTCCTATGCGGTGCTCGAACAGCCCAGCGTAGCCCATGAGGTCGAGTATTT
CGGCGCGGTCGAAGACGGGCTCTGGGACAAGATCCTCAACATGTGCGCTGGCCCCAATGCGCTGTGCCTCAACGACATGA
TGATGGTTGACGCGCTTGGCGGTGGCGGTCTGGCGGGGCTCTACAATCGAGAGCTCTATCGCGGGATTTGCTCGGCAGAC
GACCCCGAAGCGCTGCTGGCGATGCTGCGGCCTGACATTCAGGAAGAACAGCAGCGCGAAGACATTCTGCAGGCCATGAC
CCTGACCTCAGGTGACCTGCTTCCCAATTCCAACACAACAGAGGCGAACTGA

Upstream 100 bases:

>100_bases
TTTGGCCCGATCCCGTCATTGTGTCGCAGTTGCGGGCAAATCAAACCGAAATAGGTAGCAGCCCAAAGCAAATTCTACTC
TATCAGAAGGGCGGCACCCC

Downstream 100 bases:

>100_bases
CACATGGCTACGATTCCTGCTGCAACAGCAGCCGCTCAGTCCAGTGACGCCCTCAACCAGACCCATTGGTTCTGGGGCAA
GCTCGGCTGGGACATCTTTC

Product: ubiquinol oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MRYLRFLCCALAFLTLSGCNLVLLSPSGDIAAQQGDLIVYSTVLMLIVIIPVMALTVFFAFKYRAENKDARYEPDWDHSV
SLEIVVWFVPLAIIICLAGLTWVATHRLEPYDDLRRVSETKPIDPNVEPMEVQVVALDWKWLFIYPEYGVATVNEAAAIV
DRPVEWKLTSSTVMNAFYIPEMAGMIYAMAGMETELNAVINEPGTFEGFSANYSGNGFSHMRFDFIAEDEAGFEAWIEEV
RASGMTLDQDSYAVLEQPSVAHEVEYFGAVEDGLWDKILNMCAGPNALCLNDMMMVDALGGGGLAGLYNRELYRGICSAD
DPEALLAMLRPDIQEEQQREDILQAMTLTSGDLLPNSNTTEAN

Sequences:

>Translated_363_residues
MRYLRFLCCALAFLTLSGCNLVLLSPSGDIAAQQGDLIVYSTVLMLIVIIPVMALTVFFAFKYRAENKDARYEPDWDHSV
SLEIVVWFVPLAIIICLAGLTWVATHRLEPYDDLRRVSETKPIDPNVEPMEVQVVALDWKWLFIYPEYGVATVNEAAAIV
DRPVEWKLTSSTVMNAFYIPEMAGMIYAMAGMETELNAVINEPGTFEGFSANYSGNGFSHMRFDFIAEDEAGFEAWIEEV
RASGMTLDQDSYAVLEQPSVAHEVEYFGAVEDGLWDKILNMCAGPNALCLNDMMMVDALGGGGLAGLYNRELYRGICSAD
DPEALLAMLRPDIQEEQQREDILQAMTLTSGDLLPNSNTTEAN
>Mature_363_residues
MRYLRFLCCALAFLTLSGCNLVLLSPSGDIAAQQGDLIVYSTVLMLIVIIPVMALTVFFAFKYRAENKDARYEPDWDHSV
SLEIVVWFVPLAIIICLAGLTWVATHRLEPYDDLRRVSETKPIDPNVEPMEVQVVALDWKWLFIYPEYGVATVNEAAAIV
DRPVEWKLTSSTVMNAFYIPEMAGMIYAMAGMETELNAVINEPGTFEGFSANYSGNGFSHMRFDFIAEDEAGFEAWIEEV
RASGMTLDQDSYAVLEQPSVAHEVEYFGAVEDGLWDKILNMCAGPNALCLNDMMMVDALGGGGLAGLYNRELYRGICSAD
DPEALLAMLRPDIQEEQQREDILQAMTLTSGDLLPNSNTTEAN

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=281, Percent_Identity=47.3309608540925, Blast_Score=263, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 40371; Mature: 40371

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLRFLCCALAFLTLSGCNLVLLSPSGDIAAQQGDLIVYSTVLMLIVIIPVMALTVFFA
CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FKYRAENKDARYEPDWDHSVSLEIVVWFVPLAIIICLAGLTWVATHRLEPYDDLRRVSET
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
KPIDPNVEPMEVQVVALDWKWLFIYPEYGVATVNEAAAIVDRPVEWKLTSSTVMNAFYIP
CCCCCCCCCEEEEEEEEEEEEEEEECCCCCEEHHHHHHHHCCCCCEEECHHHHHHHHHHH
EMAGMIYAMAGMETELNAVINEPGTFEGFSANYSGNGFSHMRFDFIAEDEAGFEAWIEEV
HHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH
RASGMTLDQDSYAVLEQPSVAHEVEYFGAVEDGLWDKILNMCAGPNALCLNDMMMVDALG
HHCCCEECCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEECC
GGGLAGLYNRELYRGICSADDPEALLAMLRPDIQEEQQREDILQAMTLTSGDLLPNSNTT
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EAN
CCC
>Mature Secondary Structure
MRYLRFLCCALAFLTLSGCNLVLLSPSGDIAAQQGDLIVYSTVLMLIVIIPVMALTVFFA
CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FKYRAENKDARYEPDWDHSVSLEIVVWFVPLAIIICLAGLTWVATHRLEPYDDLRRVSET
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
KPIDPNVEPMEVQVVALDWKWLFIYPEYGVATVNEAAAIVDRPVEWKLTSSTVMNAFYIP
CCCCCCCCCEEEEEEEEEEEEEEEECCCCCEEHHHHHHHHCCCCCEEECHHHHHHHHHHH
EMAGMIYAMAGMETELNAVINEPGTFEGFSANYSGNGFSHMRFDFIAEDEAGFEAWIEEV
HHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH
RASGMTLDQDSYAVLEQPSVAHEVEYFGAVEDGLWDKILNMCAGPNALCLNDMMMVDALG
HHCCCEECCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEECC
GGGLAGLYNRELYRGICSADDPEALLAMLRPDIQEEQQREDILQAMTLTSGDLLPNSNTT
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EAN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]