| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082119
Identifier: 99082119
GI number: 99082119
Start: 2395984
End: 2397486
Strand: Direct
Name: 99082119
Synonym: TM1040_2279
Alternate gene names: NA
Gene position: 2395984-2397486 (Clockwise)
Preceding gene: 99082116
Following gene: 99082120
Centisome position: 74.85
GC content: 60.68
Gene sequence:
>1503_bases ATGATCCGTATCAACTCTACTCTGCTCCTGACCTCCCTGCTCTCTTTGAATGCCGCAGGGCTCAGCGCCCCCGCCTTTGC GCAGGACGAACAGGTTCTGACCACACAAGACGAGATCGGTGGCGTCTATGAGGGCGAATTCAAGGGCGGCCTGCAACATG GTCAAGGGACCTATAAGCTGCCAAACGCCTATGAATATTCCGGCCAGTGGGTCGAAGGCGAGATCAAGGGTAAGGGGGTT GCCCGTTTCCCAAATGGATCAGTCTACGAGGGTGAGTTTTCCAAGGGGAAACCCGAAGGTCTGGGCAAGATCACCTTTGC CGATGGCGGCACCTATGAAGGCGAGTGGCAAGACGGTGTGATCAATGGCCAAGGCATTGCGATCTATGCCAATGGGGTGC GCTACGAGGGGTCTTTTGTGGACGCCAAACATGACGGGCGCGGGGTGATGCAAAACCCCGGCGGCTACCAATACGAGGGC GATTGGGTTGCCGGGCGCAAGGAAGGCACTGGCAAGATCACCTACCCCGATGGCACCACCTATCAGGGCGGCGTCAAGGA CGGCAAGCTGCATGGTCTGGGGACGCTGGTGATGCCTGATGGCCTTAAATACGAGGGCGAATGGGCCGACGATCAGATGA ATGGCACCGGCGTCCTGACGCAGCCCAATGGCGACGTCTACGAGGGCCCGCTGGTCAACGGTCGTCGTCAGGGCGAGGGC GTGCTGCGCTATGCCAATGGCGATGTCTACGAGGGCCAGTTCGACGATGATCTGCGTCAGGGCGAGGGCACCTTTACTGG CACCGACGGCTATATCTACAGCGGTCAGTGGCAGGCCGGTCAGATCGAGGGTCAGGGCAAGGTCACCTACCCGGATGGGT CCGTCTATGAGGGCGAATTCCGCGATGATCTGGCGCATGGGGTTGGCAAGATCACTTACCCCGATGGCTCCACCTACGAG GGCGAATGGGTCGCTGGCGTGATCGAAGGCAACGGCAAGGCGACCTACGCCAATGGCGCCATCTATGAGGGCAGCTTCAA GAACGCCAAAAACGACGGTCAGGGCGTAATGACATCGCCCGAAGGCTATCGTTACGAGGGCGGCTGGAAGGACAGCCTGC GCCATGGCGAGGCCAAGGTGACCTATGCCGATGGATCGGTCTATGAGGGCGCGTTTGCAAATGGCCAGCGCCATGGCTTT GGCAAGATCACCCGCCCAGACGGGTTCAGCTACGAAGGCCAATGGGTCGAAGGCAAGATCGAAGGCGAAGGCATTGCGAC CTATGCCAACGGCGACATCTACGAGGGCAGCTTTGTGGGGTCCAAACGTCAGGGCCCCGGCACCATGCGCTATGCCTCCG GCCAGGAGGCCTCGGGCACTTGGAACAATGGCGCGCTTACCACACCAGATGCCGCGGCCTCTGAGGCGGATCAGAGCACG GATCCGGCCGCCGAGGAGACGCCTGACGCAGAGGCAGGCTCGGCTGGGGACGAAAGCAACTAA
Upstream 100 bases:
>100_bases GGCAAAACCATTGCGACAGGCCCCGCACTGACATAGGTTCTCGGGTAAGCACCCCATTTGACAGACCGCTCTCGACGAAC TTGAGGCAACTGAGGTTTTT
Downstream 100 bases:
>100_bases ATCGCCCGATGGCCACGCTTCTCTATCTTGTTCACGGCGCGGCCGTGCAGCAGCAACAGCAGCTTTCCTACAGTGTATTG TCCGCGCTCAAGCACGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Morn Repeat Protein; Phosphatidylinositol-4-Phosphate 5-Kinase; MORN Repeat Protein; MORN Motif-Containing Protein; MORN Domain-Containing Protein; MORN Repeat Family Protein; Peptidase; Cytoplasmic Protein; Stage V Sporulation Protein K; PEGA Domain-Containing Protein; Phosphatidylinositol 4-Phosphate 5-Kinase; MorN Domain-Containing Protein; Morn Motif-Containing Protein; Morn Repeat-Containing Protein
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MIRINSTLLLTSLLSLNAAGLSAPAFAQDEQVLTTQDEIGGVYEGEFKGGLQHGQGTYKLPNAYEYSGQWVEGEIKGKGV ARFPNGSVYEGEFSKGKPEGLGKITFADGGTYEGEWQDGVINGQGIAIYANGVRYEGSFVDAKHDGRGVMQNPGGYQYEG DWVAGRKEGTGKITYPDGTTYQGGVKDGKLHGLGTLVMPDGLKYEGEWADDQMNGTGVLTQPNGDVYEGPLVNGRRQGEG VLRYANGDVYEGQFDDDLRQGEGTFTGTDGYIYSGQWQAGQIEGQGKVTYPDGSVYEGEFRDDLAHGVGKITYPDGSTYE GEWVAGVIEGNGKATYANGAIYEGSFKNAKNDGQGVMTSPEGYRYEGGWKDSLRHGEAKVTYADGSVYEGAFANGQRHGF GKITRPDGFSYEGQWVEGKIEGEGIATYANGDIYEGSFVGSKRQGPGTMRYASGQEASGTWNNGALTTPDAAASEADQST DPAAEETPDAEAGSAGDESN
Sequences:
>Translated_500_residues MIRINSTLLLTSLLSLNAAGLSAPAFAQDEQVLTTQDEIGGVYEGEFKGGLQHGQGTYKLPNAYEYSGQWVEGEIKGKGV ARFPNGSVYEGEFSKGKPEGLGKITFADGGTYEGEWQDGVINGQGIAIYANGVRYEGSFVDAKHDGRGVMQNPGGYQYEG DWVAGRKEGTGKITYPDGTTYQGGVKDGKLHGLGTLVMPDGLKYEGEWADDQMNGTGVLTQPNGDVYEGPLVNGRRQGEG VLRYANGDVYEGQFDDDLRQGEGTFTGTDGYIYSGQWQAGQIEGQGKVTYPDGSVYEGEFRDDLAHGVGKITYPDGSTYE GEWVAGVIEGNGKATYANGAIYEGSFKNAKNDGQGVMTSPEGYRYEGGWKDSLRHGEAKVTYADGSVYEGAFANGQRHGF GKITRPDGFSYEGQWVEGKIEGEGIATYANGDIYEGSFVGSKRQGPGTMRYASGQEASGTWNNGALTTPDAAASEADQST DPAAEETPDAEAGSAGDESN >Mature_500_residues MIRINSTLLLTSLLSLNAAGLSAPAFAQDEQVLTTQDEIGGVYEGEFKGGLQHGQGTYKLPNAYEYSGQWVEGEIKGKGV ARFPNGSVYEGEFSKGKPEGLGKITFADGGTYEGEWQDGVINGQGIAIYANGVRYEGSFVDAKHDGRGVMQNPGGYQYEG DWVAGRKEGTGKITYPDGTTYQGGVKDGKLHGLGTLVMPDGLKYEGEWADDQMNGTGVLTQPNGDVYEGPLVNGRRQGEG VLRYANGDVYEGQFDDDLRQGEGTFTGTDGYIYSGQWQAGQIEGQGKVTYPDGSVYEGEFRDDLAHGVGKITYPDGSTYE GEWVAGVIEGNGKATYANGAIYEGSFKNAKNDGQGVMTSPEGYRYEGGWKDSLRHGEAKVTYADGSVYEGAFANGQRHGF GKITRPDGFSYEGQWVEGKIEGEGIATYANGDIYEGSFVGSKRQGPGTMRYASGQEASGTWNNGALTTPDAAASEADQST DPAAEETPDAEAGSAGDESN
Specific function: Unknown
COG id: COG4642
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI153792461, Length=274, Percent_Identity=35.4014598540146, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI157502187, Length=274, Percent_Identity=35.4014598540146, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI13376267, Length=207, Percent_Identity=37.6811594202899, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI40316935, Length=266, Percent_Identity=31.5789473684211, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI299523224, Length=200, Percent_Identity=34.5, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI33359215, Length=200, Percent_Identity=34.5, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI18254456, Length=157, Percent_Identity=36.9426751592357, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI270265786, Length=158, Percent_Identity=33.5443037974684, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI149999376, Length=102, Percent_Identity=40.1960784313725, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI30520314, Length=102, Percent_Identity=40.1960784313725, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI21704283, Length=348, Percent_Identity=25.5747126436782, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI225690502, Length=142, Percent_Identity=37.3239436619718, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI225690500, Length=142, Percent_Identity=37.3239436619718, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI21704281, Length=143, Percent_Identity=37.0629370629371, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI21735575, Length=145, Percent_Identity=37.2413793103448, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI18139549, Length=120, Percent_Identity=34.1666666666667, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25149766, Length=429, Percent_Identity=26.1072261072261, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI21358361, Length=205, Percent_Identity=32.1951219512195, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI19921216, Length=106, Percent_Identity=41.5094339622642, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24762835, Length=175, Percent_Identity=33.7142857142857, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI24583069, Length=346, Percent_Identity=27.7456647398844, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI24583071, Length=346, Percent_Identity=27.7456647398844, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI24654677, Length=169, Percent_Identity=33.7278106508876, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI21356481, Length=91, Percent_Identity=41.7582417582418, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53152; Mature: 53152
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS00658 FORK_HEAD_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRINSTLLLTSLLSLNAAGLSAPAFAQDEQVLTTQDEIGGVYEGEFKGGLQHGQGTYKL CEEECHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHCCEEECCCCCCCCCCCCCEEC PNAYEYSGQWVEGEIKGKGVARFPNGSVYEGEFSKGKPEGLGKITFADGGTYEGEWQDGV CCCEECCCEEEEEEECCCEEEECCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCE INGQGIAIYANGVRYEGSFVDAKHDGRGVMQNPGGYQYEGDWVAGRKEGTGKITYPDGTT ECCCEEEEEECCEEECCCEEECCCCCCCCEECCCCCEECCCEEECCCCCCCEEECCCCCC YQGGVKDGKLHGLGTLVMPDGLKYEGEWADDQMNGTGVLTQPNGDVYEGPLVNGRRQGEG EECCCCCCEEECEEEEECCCCCEECCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCC VLRYANGDVYEGQFDDDLRQGEGTFTGTDGYIYSGQWQAGQIEGQGKVTYPDGSVYEGEF EEEECCCCEECCCCCCHHHHCCCCEECCCCEEECCCCCCCEECCCCEEECCCCCEECCHH RDDLAHGVGKITYPDGSTYEGEWVAGVIEGNGKATYANGAIYEGSFKNAKNDGQGVMTSP HHHHHHCCCEEECCCCCCCCCCEEEEEEECCCEEEECCCEEEECCCCCCCCCCCEEEECC EGYRYEGGWKDSLRHGEAKVTYADGSVYEGAFANGQRHGFGKITRPDGFSYEGQWVEGKI CCEEECCCCHHHHCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE EGEGIATYANGDIYEGSFVGSKRQGPGTMRYASGQEASGTWNNGALTTPDAAASEADQST CCCEEEEEECCCEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEECCCHHHCCCCCCC DPAAEETPDAEAGSAGDESN CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIRINSTLLLTSLLSLNAAGLSAPAFAQDEQVLTTQDEIGGVYEGEFKGGLQHGQGTYKL CEEECHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHCCEEECCCCCCCCCCCCCEEC PNAYEYSGQWVEGEIKGKGVARFPNGSVYEGEFSKGKPEGLGKITFADGGTYEGEWQDGV CCCEECCCEEEEEEECCCEEEECCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCE INGQGIAIYANGVRYEGSFVDAKHDGRGVMQNPGGYQYEGDWVAGRKEGTGKITYPDGTT ECCCEEEEEECCEEECCCEEECCCCCCCCEECCCCCEECCCEEECCCCCCCEEECCCCCC YQGGVKDGKLHGLGTLVMPDGLKYEGEWADDQMNGTGVLTQPNGDVYEGPLVNGRRQGEG EECCCCCCEEECEEEEECCCCCEECCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCC VLRYANGDVYEGQFDDDLRQGEGTFTGTDGYIYSGQWQAGQIEGQGKVTYPDGSVYEGEF EEEECCCCEECCCCCCHHHHCCCCEECCCCEEECCCCCCCEECCCCEEECCCCCEECCHH RDDLAHGVGKITYPDGSTYEGEWVAGVIEGNGKATYANGAIYEGSFKNAKNDGQGVMTSP HHHHHHCCCEEECCCCCCCCCCEEEEEEECCCEEEECCCEEEECCCCCCCCCCCEEEECC EGYRYEGGWKDSLRHGEAKVTYADGSVYEGAFANGQRHGFGKITRPDGFSYEGQWVEGKI CCEEECCCCHHHHCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE EGEGIATYANGDIYEGSFVGSKRQGPGTMRYASGQEASGTWNNGALTTPDAAASEADQST CCCEEEEEECCCEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEECCCHHHCCCCCCC DPAAEETPDAEAGSAGDESN CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA