| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082107
Identifier: 99082107
GI number: 99082107
Start: 2382231
End: 2382629
Strand: Reverse
Name: 99082107
Synonym: TM1040_2267
Alternate gene names: NA
Gene position: 2382629-2382231 (Counterclockwise)
Preceding gene: 99082108
Following gene: 99082105
Centisome position: 74.44
GC content: 61.4
Gene sequence:
>399_bases ATGTTCCGCCTTTCCCTTACCCTGCCTGCCCTCGCGGTCCTTGCCGCCTGCGCCACACCCCAGGAGCGTTGCATCCGCGA AGGCGCCTCCGAACAGACGCAGCTTCAACGCCAGATTACCGAGAGCGAAGGCAATATCGCGCGCGGCTATGCCATCCATC GCCAAACCGTCCCGGAGACAGTGTTTCACAGCTGCCGACGGGTGAAGGACGGCAAGGTGGTGGGCTATTATCCGTGCCCC GAGACCTATTATCGCACGATTGAAACCCCGGTAAGCATTGATATGGATGACGAACGCCGCAAGCTGCGCCGCCTCAAGGA TGCGTTGCCTGCCGCCCAAAAGCGTGCCGCCGAGGCGGCCGCTCAGTGCCGGGTGCTTTATCCCGAAAAATCCATCTGA
Upstream 100 bases:
>100_bases GTCTGCATGGGTCATGGGGCCTTGTTATCGCATAACAGCTGCCTCCCTGCTAAGATTGCGGCATCAAAAAATGGATTGCC GCAATTACAGGACGATATTC
Downstream 100 bases:
>100_bases GCCCTGTGGCGCAGACCTCTAGCCAAATGTTGTGACCACGTCATACATCACTGGCTCGAAGCTGCGGCAGAGCGCATTCA GCTCCCGGTTGCGCTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MFRLSLTLPALAVLAACATPQERCIREGASEQTQLQRQITESEGNIARGYAIHRQTVPETVFHSCRRVKDGKVVGYYPCP ETYYRTIETPVSIDMDDERRKLRRLKDALPAAQKRAAEAAAQCRVLYPEKSI
Sequences:
>Translated_132_residues MFRLSLTLPALAVLAACATPQERCIREGASEQTQLQRQITESEGNIARGYAIHRQTVPETVFHSCRRVKDGKVVGYYPCP ETYYRTIETPVSIDMDDERRKLRRLKDALPAAQKRAAEAAAQCRVLYPEKSI >Mature_132_residues MFRLSLTLPALAVLAACATPQERCIREGASEQTQLQRQITESEGNIARGYAIHRQTVPETVFHSCRRVKDGKVVGYYPCP ETYYRTIETPVSIDMDDERRKLRRLKDALPAAQKRAAEAAAQCRVLYPEKSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14939; Mature: 14939
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLSLTLPALAVLAACATPQERCIREGASEQTQLQRQITESEGNIARGYAIHRQTVPET CEEECHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHH VFHSCRRVKDGKVVGYYPCPETYYRTIETPVSIDMDDERRKLRRLKDALPAAQKRAAEAA HHHHHHHCCCCCEEEEECCCHHHHHHHCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHH AQCRVLYPEKSI HHCEEECCCCCC >Mature Secondary Structure MFRLSLTLPALAVLAACATPQERCIREGASEQTQLQRQITESEGNIARGYAIHRQTVPET CEEECHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHH VFHSCRRVKDGKVVGYYPCPETYYRTIETPVSIDMDDERRKLRRLKDALPAAQKRAAEAA HHHHHHHCCCCCEEEEECCCHHHHHHHCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHH AQCRVLYPEKSI HHCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA