Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082105

Identifier: 99082105

GI number: 99082105

Start: 2381126

End: 2381788

Strand: Reverse

Name: 99082105

Synonym: TM1040_2265

Alternate gene names: NA

Gene position: 2381788-2381126 (Counterclockwise)

Preceding gene: 99082107

Following gene: 99082104

Centisome position: 74.41

GC content: 65.01

Gene sequence:

>663_bases
ATGCGTCTGCCCCTCGTCCTGTCGTTGGTTTACGCCCTTTCCACGCTGCCCGCGCTCGCTGGGGCGTGGCTTGAGGCGGA
GGGGCGCGGTTTCACCTCAAGCGCGCTGCGGACGCGCGGCTCCGGGCAGGAAGTCAGCGGCTATATCGCCTATGGGGTCT
CGCAGCGGCTGACCTTTGGACTCGATCTCAATCAAAGCACGGACGCCCAGAACCAGAGCGCGCATGCGCTCGTCTTTACG
CGCCTGCCCCTGCGCCAGTCGGAGACGGGCTGGCAACTGGCCTTTGAGATGGCAGCCGGGTTTGGGCGTGTCGAGACACA
ATGGAGCGGCATGAAACGGCTCGGTCTTTCGGCAGGGCGGGGGCTCAGTTGGCCCACGCGCGGAGCTTGGGTCAATTTCG
ACCTGATCCGAGAGTGGCGCGAGGAAGGCCTGGCAAAGGCGTGGAAGCTCGACGGTGCTTTTGGTTTTGAGCGCAGGTCC
GGACCAGCGGTGATCTTTCGCGGCGAGGTTTTTCAACCCGACGCGGGCGCGCGGATCTGGAAGGTTCTGCCCGGTTTGCG
CTGGCGCCTCTCCCCCAAGCGTGAGCTGTTGACGGGGCTGGAGTGGCGCTCTTTCGGGCAGGAACGGCTTGGCCTGACGC
TGGAGTTGTGGCAGAGGTTCTAG

Upstream 100 bases:

>100_bases
ACGTCCTCCCTTATTCAGAGCGTAATCCAATGCGCTTGAAAGTCTACCATGCGTTGCTCTATCATAGGGAGAGTGGGTGT
GATTTCAGAAGGCTTTGCCA

Downstream 100 bases:

>100_bases
ACAGCAGACCTACCGCCTCGCCAGCCGGATTTCGATCCGCCCGCCCGGACACATTTACAGATCGGAAACGTGCGAGCATG
CCACAAGATACCCCACCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRLPLVLSLVYALSTLPALAGAWLEAEGRGFTSSALRTRGSGQEVSGYIAYGVSQRLTFGLDLNQSTDAQNQSAHALVFT
RLPLRQSETGWQLAFEMAAGFGRVETQWSGMKRLGLSAGRGLSWPTRGAWVNFDLIREWREEGLAKAWKLDGAFGFERRS
GPAVIFRGEVFQPDAGARIWKVLPGLRWRLSPKRELLTGLEWRSFGQERLGLTLELWQRF

Sequences:

>Translated_220_residues
MRLPLVLSLVYALSTLPALAGAWLEAEGRGFTSSALRTRGSGQEVSGYIAYGVSQRLTFGLDLNQSTDAQNQSAHALVFT
RLPLRQSETGWQLAFEMAAGFGRVETQWSGMKRLGLSAGRGLSWPTRGAWVNFDLIREWREEGLAKAWKLDGAFGFERRS
GPAVIFRGEVFQPDAGARIWKVLPGLRWRLSPKRELLTGLEWRSFGQERLGLTLELWQRF
>Mature_220_residues
MRLPLVLSLVYALSTLPALAGAWLEAEGRGFTSSALRTRGSGQEVSGYIAYGVSQRLTFGLDLNQSTDAQNQSAHALVFT
RLPLRQSETGWQLAFEMAAGFGRVETQWSGMKRLGLSAGRGLSWPTRGAWVNFDLIREWREEGLAKAWKLDGAFGFERRS
GPAVIFRGEVFQPDAGARIWKVLPGLRWRLSPKRELLTGLEWRSFGQERLGLTLELWQRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24674; Mature: 24674

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPLVLSLVYALSTLPALAGAWLEAEGRGFTSSALRTRGSGQEVSGYIAYGVSQRLTFG
CCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHCCCCCCCCCEEEEECCCCCEEEE
LDLNQSTDAQNQSAHALVFTRLPLRQSETGWQLAFEMAAGFGRVETQWSGMKRLGLSAGR
ECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
GLSWPTRGAWVNFDLIREWREEGLAKAWKLDGAFGFERRSGPAVIFRGEVFQPDAGARIW
CCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEECCCCCCHHH
KVLPGLRWRLSPKRELLTGLEWRSFGQERLGLTLELWQRF
HHCCCCEECCCCHHHHHHCCHHHHCCHHHHCEEHHHHHCC
>Mature Secondary Structure
MRLPLVLSLVYALSTLPALAGAWLEAEGRGFTSSALRTRGSGQEVSGYIAYGVSQRLTFG
CCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHCCCCCCCCCEEEEECCCCCEEEE
LDLNQSTDAQNQSAHALVFTRLPLRQSETGWQLAFEMAAGFGRVETQWSGMKRLGLSAGR
ECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
GLSWPTRGAWVNFDLIREWREEGLAKAWKLDGAFGFERRSGPAVIFRGEVFQPDAGARIW
CCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEECCCCCCHHH
KVLPGLRWRLSPKRELLTGLEWRSFGQERLGLTLELWQRF
HHCCCCEECCCCHHHHHHCCHHHHCCHHHHCEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA