| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082068
Identifier: 99082068
GI number: 99082068
Start: 2341200
End: 2341916
Strand: Direct
Name: 99082068
Synonym: TM1040_2228
Alternate gene names: NA
Gene position: 2341200-2341916 (Clockwise)
Preceding gene: 99082067
Following gene: 99082070
Centisome position: 73.14
GC content: 59.83
Gene sequence:
>717_bases ATGGTGACCCCTGTGTATGAGGTAAGTGAGTACGCCGGCAACATGCTGACAGTCGAGATCCGGGAGGCGGCAGGCGGACG CGACCAGACAGTTGCTGCGGTGACGTTGAATTCGGACGAACTGAAAAACACCCTGCACTTCTCGGGACGGCGCAGCATCT CCGACGTGTTCCACCCGGACTTCGCAGACTATCTGCAAAATCTGCTCGCCCGCGCGGTCGAGGCCCCGATGGTTCTGACC GACCCGGATGTGATCCAGTCGTTCGGCGGCGCCGTGGTTGCGCGGATGCGCATGCTCGTTAACAAGGCGGTGGATGGGGG GCGTCACATCACGGTGCGTTTCGCCTATTTCATCGGCGCGATGTCTGGTTTGTTTCGCCGCGATGAGTTAAGCCATCACA TGCCGCTGCCCCATCGGGAGCGCGCTGCGGTGCAGGCGCTCGACAGCATCTGCACGCCTCTGAGCAATATCGCCTCGCAC CTGGATCGCATCCTTGAAAATCGAAATGCCACGGAATCCGTGCGCTCTCGTTTGCGCAAGATCGAGGATGAAACCGTCGA GCTGAAGTTCTACACAGAGTTGTTGCGGCGATATGTGGATGATTGCGCGCGAGAGCGTGCCGGGCACGAGGAAGACCACG CTCTCGAGTATGAGAACGGCGAGGCAACCACTGCCATCGAAGAGGTTGAGCGCATGATGGTGGAAACCGGGACGTAG
Upstream 100 bases:
>100_bases CACTTGTTCGCCAATTCACACACATGATTATTTCGATCTGTCTAGTCTTGTTTTGACAAATACCGCCTTTAATTTAGACA CTTAGTGTTCCTCCAATTAA
Downstream 100 bases:
>100_bases CGCGGGGCGTCTTGTTCCACACGCTACCCCCGGGAGCATGACTGCTCTGGTTGCGGCCGGGATCCCTTGAGCCGAAAGTT GGACCTTGCCAACCGGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MVTPVYEVSEYAGNMLTVEIREAAGGRDQTVAAVTLNSDELKNTLHFSGRRSISDVFHPDFADYLQNLLARAVEAPMVLT DPDVIQSFGGAVVARMRMLVNKAVDGGRHITVRFAYFIGAMSGLFRRDELSHHMPLPHRERAAVQALDSICTPLSNIASH LDRILENRNATESVRSRLRKIEDETVELKFYTELLRRYVDDCARERAGHEEDHALEYENGEATTAIEEVERMMVETGT
Sequences:
>Translated_238_residues MVTPVYEVSEYAGNMLTVEIREAAGGRDQTVAAVTLNSDELKNTLHFSGRRSISDVFHPDFADYLQNLLARAVEAPMVLT DPDVIQSFGGAVVARMRMLVNKAVDGGRHITVRFAYFIGAMSGLFRRDELSHHMPLPHRERAAVQALDSICTPLSNIASH LDRILENRNATESVRSRLRKIEDETVELKFYTELLRRYVDDCARERAGHEEDHALEYENGEATTAIEEVERMMVETGT >Mature_238_residues MVTPVYEVSEYAGNMLTVEIREAAGGRDQTVAAVTLNSDELKNTLHFSGRRSISDVFHPDFADYLQNLLARAVEAPMVLT DPDVIQSFGGAVVARMRMLVNKAVDGGRHITVRFAYFIGAMSGLFRRDELSHHMPLPHRERAAVQALDSICTPLSNIASH LDRILENRNATESVRSRLRKIEDETVELKFYTELLRRYVDDCARERAGHEEDHALEYENGEATTAIEEVERMMVETGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26795; Mature: 26795
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTPVYEVSEYAGNMLTVEIREAAGGRDQTVAAVTLNSDELKNTLHFSGRRSISDVFHPD CCCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHCCCC FADYLQNLLARAVEAPMVLTDPDVIQSFGGAVVARMRMLVNKAVDGGRHITVRFAYFIGA HHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH MSGLFRRDELSHHMPLPHRERAAVQALDSICTPLSNIASHLDRILENRNATESVRSRLRK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IEDETVELKFYTELLRRYVDDCARERAGHEEDHALEYENGEATTAIEEVERMMVETGT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVTPVYEVSEYAGNMLTVEIREAAGGRDQTVAAVTLNSDELKNTLHFSGRRSISDVFHPD CCCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHCCCC FADYLQNLLARAVEAPMVLTDPDVIQSFGGAVVARMRMLVNKAVDGGRHITVRFAYFIGA HHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH MSGLFRRDELSHHMPLPHRERAAVQALDSICTPLSNIASHLDRILENRNATESVRSRLRK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IEDETVELKFYTELLRRYVDDCARERAGHEEDHALEYENGEATTAIEEVERMMVETGT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA