Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081961

Identifier: 99081961

GI number: 99081961

Start: 2226311

End: 2227423

Strand: Direct

Name: 99081961

Synonym: TM1040_2121

Alternate gene names: NA

Gene position: 2226311-2227423 (Clockwise)

Preceding gene: 99081960

Following gene: 99081964

Centisome position: 69.55

GC content: 64.69

Gene sequence:

>1113_bases
ATGTACCATTTTACAACCCCGCCGTTGGGACCAGTCGTGATCTTACCGAGCGCCATCGCCACCGCGAATGGCCCCCAAGC
TGCCGCCGTCTCCATTTCTGACAGTGAGAGCCTGACCACAAATCAGTTGCACAATCAGCTGTCCGAGGCCCGTCGCGCTC
GTGACAAGATGATCGAGCAAGTCAGTCGGCCACCGGAGCCCGGCTGGAAATCCGCGATGCATCAGATCTCGGATACCGTC
GACCACATGGAGAAAGTCCTCGATCTCCTGCGTTCTCATGTTTCCGCCTTGCCTGCGTCCCCGGCGACAGGGTCAGATCC
GCTTGCGGTCTACCCCTCCGGCGTCGCAATGCAGCAGTCTGGCAGGACGCCAGACAGTCCACCGTCGGTGGCAGAAGCCC
CGGCGGCCCCAACCGCTGCGTCCGATCCGGCAGCCCCCCCCGCAGCTGGCCCTCAGGACCCCAATGTAAGCGCTCAGGCG
CTGGCCTCCTCGCAGCCGCGGGTGATCTACGTGATGAATGACGGCGTTGTCATCATCGGCCTCCCCCAAACCGAAGCGGA
CGCCACCACCGGGACCGCTGAGGCGGCCTCCCCCGCCTCGCGCGACAACAGCACTGATGCGGCAGGACGTGCCGATCCTC
TGCAGCCCCCGCAATCAGGAGCACCCATGACCGCCAATACCGTGATCAGCCTGCCCCTCACCGAAGACCAGAAACGTGCC
AGCGCTGATCTGATCGCGCTGGCTAAAAAGGCCTACGCCTATCAGGCTCAGCCTCGGGATGCACAAGCGGCAGAGCTGAT
TTCTGACGAGAATGTGGGCCTCACCGGTGCACTGTCCGAGTCGCCTGAACTCAGCGCCCCTGACCGGCCGGAGCGGGCTC
CGGTGCCGCGCATCCTGACGGCGGAGCTGGCGCAACCTGATGCCGGGTCGCAGCGCCCTGCGGCCAATGATGATCCGCTG
ATTGCCGCCGCAGCACCGTATGCCCGCGACCCGCAGCGCGAGGCGGCACAGGCCCAGGAAGAGCAGCAGATCCTCGCGCT
ACAGCTGGATGGCCATCACGACATCATCTATATTGTGCCTCCGGCGCAGGCGGCGATTGATCTGACGGCCTGA

Upstream 100 bases:

>100_bases
CAATAGCATTTTAGGGGCTCCGTTTACGGAGGTTAGGACCGTGTTAACCTGTCCCTCCAAATGATTAACGGACGTCAAGT
GTTTGCTTGGAGCGTAAGTG

Downstream 100 bases:

>100_bases
TCCCGCGCGCATTCTACAGGCCTGGGCGCCGGTGCGGTCTGGCCGATATATACCCGCAAGGCGCAGCGCAGCGAGTCTCG
CCTCAGCTGTCGCAGTCCTC

Product: putative CheA signal transduction histidine kinases

Products: NA

Alternate protein names: CheA Signal Transduction Histidine Kinase

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MYHFTTPPLGPVVILPSAIATANGPQAAAVSISDSESLTTNQLHNQLSEARRARDKMIEQVSRPPEPGWKSAMHQISDTV
DHMEKVLDLLRSHVSALPASPATGSDPLAVYPSGVAMQQSGRTPDSPPSVAEAPAAPTAASDPAAPPAAGPQDPNVSAQA
LASSQPRVIYVMNDGVVIIGLPQTEADATTGTAEAASPASRDNSTDAAGRADPLQPPQSGAPMTANTVISLPLTEDQKRA
SADLIALAKKAYAYQAQPRDAQAAELISDENVGLTGALSESPELSAPDRPERAPVPRILTAELAQPDAGSQRPAANDDPL
IAAAAPYARDPQREAAQAQEEQQILALQLDGHHDIIYIVPPAQAAIDLTA

Sequences:

>Translated_370_residues
MYHFTTPPLGPVVILPSAIATANGPQAAAVSISDSESLTTNQLHNQLSEARRARDKMIEQVSRPPEPGWKSAMHQISDTV
DHMEKVLDLLRSHVSALPASPATGSDPLAVYPSGVAMQQSGRTPDSPPSVAEAPAAPTAASDPAAPPAAGPQDPNVSAQA
LASSQPRVIYVMNDGVVIIGLPQTEADATTGTAEAASPASRDNSTDAAGRADPLQPPQSGAPMTANTVISLPLTEDQKRA
SADLIALAKKAYAYQAQPRDAQAAELISDENVGLTGALSESPELSAPDRPERAPVPRILTAELAQPDAGSQRPAANDDPL
IAAAAPYARDPQREAAQAQEEQQILALQLDGHHDIIYIVPPAQAAIDLTA
>Mature_370_residues
MYHFTTPPLGPVVILPSAIATANGPQAAAVSISDSESLTTNQLHNQLSEARRARDKMIEQVSRPPEPGWKSAMHQISDTV
DHMEKVLDLLRSHVSALPASPATGSDPLAVYPSGVAMQQSGRTPDSPPSVAEAPAAPTAASDPAAPPAAGPQDPNVSAQA
LASSQPRVIYVMNDGVVIIGLPQTEADATTGTAEAASPASRDNSTDAAGRADPLQPPQSGAPMTANTVISLPLTEDQKRA
SADLIALAKKAYAYQAQPRDAQAAELISDENVGLTGALSESPELSAPDRPERAPVPRILTAELAQPDAGSQRPAANDDPL
IAAAAPYARDPQREAAQAQEEQQILALQLDGHHDIIYIVPPAQAAIDLTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38362; Mature: 38362

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHFTTPPLGPVVILPSAIATANGPQAAAVSISDSESLTTNQLHNQLSEARRARDKMIEQ
CCCCCCCCCCCEEECCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSRPPEPGWKSAMHQISDTVDHMEKVLDLLRSHVSALPASPATGSDPLAVYPSGVAMQQS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEECCC
GRTPDSPPSVAEAPAAPTAASDPAAPPAAGPQDPNVSAQALASSQPRVIYVMNDGVVIIG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCEEEEE
LPQTEADATTGTAEAASPASRDNSTDAAGRADPLQPPQSGAPMTANTVISLPLTEDQKRA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH
SADLIALAKKAYAYQAQPRDAQAAELISDENVGLTGALSESPELSAPDRPERAPVPRILT
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHH
AELAQPDAGSQRPAANDDPLIAAAAPYARDPQREAAQAQEEQQILALQLDGHHDIIYIVP
HHHCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCEEEEEEECCCCCEEEEEC
PAQAAIDLTA
CCCCEEEECC
>Mature Secondary Structure
MYHFTTPPLGPVVILPSAIATANGPQAAAVSISDSESLTTNQLHNQLSEARRARDKMIEQ
CCCCCCCCCCCEEECCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSRPPEPGWKSAMHQISDTVDHMEKVLDLLRSHVSALPASPATGSDPLAVYPSGVAMQQS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEECCC
GRTPDSPPSVAEAPAAPTAASDPAAPPAAGPQDPNVSAQALASSQPRVIYVMNDGVVIIG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCEEEEE
LPQTEADATTGTAEAASPASRDNSTDAAGRADPLQPPQSGAPMTANTVISLPLTEDQKRA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH
SADLIALAKKAYAYQAQPRDAQAAELISDENVGLTGALSESPELSAPDRPERAPVPRILT
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHH
AELAQPDAGSQRPAANDDPLIAAAAPYARDPQREAAQAQEEQQILALQLDGHHDIIYIVP
HHHCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCEEEEEEECCCCCEEEEEC
PAQAAIDLTA
CCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA