Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081851

Identifier: 99081851

GI number: 99081851

Start: 2116316

End: 2116756

Strand: Direct

Name: 99081851

Synonym: TM1040_2011

Alternate gene names: NA

Gene position: 2116316-2116756 (Clockwise)

Preceding gene: 99081849

Following gene: 99081852

Centisome position: 66.12

GC content: 62.13

Gene sequence:

>441_bases
ATGGGCTACCGGGTTGCAGCGCGCGTCTTATCAGCGGCGGAAGTCGGCGGGACGCATACCCGTGAAGGCTGTTCATTCTG
GCCCACGCCGACGTTCAAGAGCTCAGGCAATCGCGCTTGCATCGCTGGGGGCCCGGAGGGGATCCAGTTCAAGACCGATC
AGAACCAGACCGGCTCACAGATCGGGATCAAGACCGCCGCAACCGCCTGGACGCTCATGTGGGACTTGATGATGGCGGCG
GGTTGGACCCCTCAGCGGTTCCGGTCTTCCCACCGCTTCCGGGTGATTTTGCTGAATGGGGAGAAATACTCGGATCATCC
CCTAACCTTAAACCCTGCCTTCACGGACTGGATGATGGGGTGGCCTTCGGGCTGGACCGATCCGCTGCAGCCGGTAACGG
GGTGGTGCCAATGGCTGCGGCACGCGCGTACCTTGATCTGA

Upstream 100 bases:

>100_bases
CGGGGTTGCGGTTGACCACTAGCAGAAGAACCGCTGGCGAGACCATCGCCCGCGATCCGGCGACACTGACCTCCAAGACG
TCACCCGAGATCTTCAGGCA

Downstream 100 bases:

>100_bases
AAAAGGCCCTCGCTTGAAGCAACCCTTTGAAGGGGCTTAAACGCCCCTTCAATCCCGCCTCAACCCAAAAACTGGTTGCT
GTAAAAAAGTCTGTAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MGYRVAARVLSAAEVGGTHTREGCSFWPTPTFKSSGNRACIAGGPEGIQFKTDQNQTGSQIGIKTAATAWTLMWDLMMAA
GWTPQRFRSSHRFRVILLNGEKYSDHPLTLNPAFTDWMMGWPSGWTDPLQPVTGWCQWLRHARTLI

Sequences:

>Translated_146_residues
MGYRVAARVLSAAEVGGTHTREGCSFWPTPTFKSSGNRACIAGGPEGIQFKTDQNQTGSQIGIKTAATAWTLMWDLMMAA
GWTPQRFRSSHRFRVILLNGEKYSDHPLTLNPAFTDWMMGWPSGWTDPLQPVTGWCQWLRHARTLI
>Mature_145_residues
GYRVAARVLSAAEVGGTHTREGCSFWPTPTFKSSGNRACIAGGPEGIQFKTDQNQTGSQIGIKTAATAWTLMWDLMMAAG
WTPQRFRSSHRFRVILLNGEKYSDHPLTLNPAFTDWMMGWPSGWTDPLQPVTGWCQWLRHARTLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16329; Mature: 16198

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYRVAARVLSAAEVGGTHTREGCSFWPTPTFKSSGNRACIAGGPEGIQFKTDQNQTGSQ
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC
IGIKTAATAWTLMWDLMMAAGWTPQRFRSSHRFRVILLNGEKYSDHPLTLNPAFTDWMMG
CCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCCCCCCEEECCCHHHHHCC
WPSGWTDPLQPVTGWCQWLRHARTLI
CCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GYRVAARVLSAAEVGGTHTREGCSFWPTPTFKSSGNRACIAGGPEGIQFKTDQNQTGSQ
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC
IGIKTAATAWTLMWDLMMAAGWTPQRFRSSHRFRVILLNGEKYSDHPLTLNPAFTDWMMG
CCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCCCCCCEEECCCHHHHHCC
WPSGWTDPLQPVTGWCQWLRHARTLI
CCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA