| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081836
Identifier: 99081836
GI number: 99081836
Start: 2100825
End: 2101094
Strand: Reverse
Name: 99081836
Synonym: TM1040_1996
Alternate gene names: NA
Gene position: 2101094-2100825 (Counterclockwise)
Preceding gene: 99081840
Following gene: 99081835
Centisome position: 65.64
GC content: 56.3
Gene sequence:
>270_bases GTGACCAAGGCCCATAAAACGGCGTCATTGCTTTGCTGCGGAGCAGAGCGTGTTTTGCGCTGGTTTAGCGACAATTGGCG GAGCGGGCAGCACGCGGGGCCCGCCCGGCGACTGCGTGAAGGGCAGTGTCCCTTAAGAGCGGAGCAGGCGATGACCCGCG GATTTGGTATGAATATTCTGCAAAGTGAAATTTGTGCTGTTCCTCTGTGGGGGTGGTATTCGCTTCCGTTGCGTCACGTT TTGGTTCGTTTTGCATGGGAATCCTACTGA
Upstream 100 bases:
>100_bases GTGCCATGATCGCTACCTCTTACCCGCAGATCCGCCAGAACTCTCGAGATCTGTGATTATACACGCTGTTATAGTTTGCG GACACACTCCTTAACTTTTG
Downstream 100 bases:
>100_bases TTCTGTCCTTTATGGTCATGTATATAAAGCCATTATTGAAATTTTCACGCCTTGGTTGAGCGCAGTTGACGGGTGCCAGA TGGTTGTGTTCTCGATAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTKAHKTASLLCCGAERVLRWFSDNWRSGQHAGPARRLREGQCPLRAEQAMTRGFGMNILQSEICAVPLWGWYSLPLRHV LVRFAWESY
Sequences:
>Translated_89_residues MTKAHKTASLLCCGAERVLRWFSDNWRSGQHAGPARRLREGQCPLRAEQAMTRGFGMNILQSEICAVPLWGWYSLPLRHV LVRFAWESY >Mature_88_residues TKAHKTASLLCCGAERVLRWFSDNWRSGQHAGPARRLREGQCPLRAEQAMTRGFGMNILQSEICAVPLWGWYSLPLRHVL VRFAWESY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10262; Mature: 10131
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAHKTASLLCCGAERVLRWFSDNWRSGQHAGPARRLREGQCPLRAEQAMTRGFGMNIL CCCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCHHH QSEICAVPLWGWYSLPLRHVLVRFAWESY HHHHHCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKAHKTASLLCCGAERVLRWFSDNWRSGQHAGPARRLREGQCPLRAEQAMTRGFGMNIL CCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCHHH QSEICAVPLWGWYSLPLRHVLVRFAWESY HHHHHCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA