| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081833
Identifier: 99081833
GI number: 99081833
Start: 2098899
End: 2099207
Strand: Reverse
Name: 99081833
Synonym: TM1040_1993
Alternate gene names: NA
Gene position: 2099207-2098899 (Counterclockwise)
Preceding gene: 99081835
Following gene: 99081832
Centisome position: 65.58
GC content: 57.28
Gene sequence:
>309_bases ATGGATTTCAACGTTCAAAGAAAATGTCTCGAGACCCGGCTGAATGCGCTTTCGTCGGGGATGCTGGCGGGGCAGGGTTT GTCGGCCCTCGCGCGCGACGGCGTGACGATCGACGATGAGGTGAACCTGCTGACGCGACAGAGCAAAATGACCTCCTTGA TGGGCCGCGAAGTCAAAGCGATCTTGACGGCGCTCGACCGGATGGAGGCAGGCGAATACGGCTATTGCCGCATTTGTGGT GCGGATATTTCCTCAGAGCATTTGAGTGCTCACCCGGAATCTCCTTTCTGTGAGTTCTGCTCGGCCTGA
Upstream 100 bases:
>100_bases AGGGCGCCGCCCGCTTGGAGCGCGTCCCGCTTTTGGCCGGTGATCCCTGTGTCTGCGCGCTCTGAGTTGTATCGGTTTTT TTGTTTTGCGAGGAGAGACC
Downstream 100 bases:
>100_bases GATTTGTGGCCAGAGTGTCCGCCTGACCCCTAGAGCATCGTTATCGAAACACCGGCGTCGACCGCGTCACGGGCATTTGT CTATGCGCTGGTTCATGCGG
Product: TraR/DksA family transcriptional regulator
Products: NA
Alternate protein names: TraR/DksA Family Transcriptional Regulator
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MDFNVQRKCLETRLNALSSGMLAGQGLSALARDGVTIDDEVNLLTRQSKMTSLMGREVKAILTALDRMEAGEYGYCRICG ADISSEHLSAHPESPFCEFCSA
Sequences:
>Translated_102_residues MDFNVQRKCLETRLNALSSGMLAGQGLSALARDGVTIDDEVNLLTRQSKMTSLMGREVKAILTALDRMEAGEYGYCRICG ADISSEHLSAHPESPFCEFCSA >Mature_102_residues MDFNVQRKCLETRLNALSSGMLAGQGLSALARDGVTIDDEVNLLTRQSKMTSLMGREVKAILTALDRMEAGEYGYCRICG ADISSEHLSAHPESPFCEFCSA
Specific function: Unknown
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11105; Mature: 11105
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFNVQRKCLETRLNALSSGMLAGQGLSALARDGVTIDDEVNLLTRQSKMTSLMGREVKA CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH ILTALDRMEAGEYGYCRICGADISSEHLSAHPESPFCEFCSA HHHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCCCHHHHCCC >Mature Secondary Structure MDFNVQRKCLETRLNALSSGMLAGQGLSALARDGVTIDDEVNLLTRQSKMTSLMGREVKA CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH ILTALDRMEAGEYGYCRICGADISSEHLSAHPESPFCEFCSA HHHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA