Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081833

Identifier: 99081833

GI number: 99081833

Start: 2098899

End: 2099207

Strand: Reverse

Name: 99081833

Synonym: TM1040_1993

Alternate gene names: NA

Gene position: 2099207-2098899 (Counterclockwise)

Preceding gene: 99081835

Following gene: 99081832

Centisome position: 65.58

GC content: 57.28

Gene sequence:

>309_bases
ATGGATTTCAACGTTCAAAGAAAATGTCTCGAGACCCGGCTGAATGCGCTTTCGTCGGGGATGCTGGCGGGGCAGGGTTT
GTCGGCCCTCGCGCGCGACGGCGTGACGATCGACGATGAGGTGAACCTGCTGACGCGACAGAGCAAAATGACCTCCTTGA
TGGGCCGCGAAGTCAAAGCGATCTTGACGGCGCTCGACCGGATGGAGGCAGGCGAATACGGCTATTGCCGCATTTGTGGT
GCGGATATTTCCTCAGAGCATTTGAGTGCTCACCCGGAATCTCCTTTCTGTGAGTTCTGCTCGGCCTGA

Upstream 100 bases:

>100_bases
AGGGCGCCGCCCGCTTGGAGCGCGTCCCGCTTTTGGCCGGTGATCCCTGTGTCTGCGCGCTCTGAGTTGTATCGGTTTTT
TTGTTTTGCGAGGAGAGACC

Downstream 100 bases:

>100_bases
GATTTGTGGCCAGAGTGTCCGCCTGACCCCTAGAGCATCGTTATCGAAACACCGGCGTCGACCGCGTCACGGGCATTTGT
CTATGCGCTGGTTCATGCGG

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: TraR/DksA Family Transcriptional Regulator

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MDFNVQRKCLETRLNALSSGMLAGQGLSALARDGVTIDDEVNLLTRQSKMTSLMGREVKAILTALDRMEAGEYGYCRICG
ADISSEHLSAHPESPFCEFCSA

Sequences:

>Translated_102_residues
MDFNVQRKCLETRLNALSSGMLAGQGLSALARDGVTIDDEVNLLTRQSKMTSLMGREVKAILTALDRMEAGEYGYCRICG
ADISSEHLSAHPESPFCEFCSA
>Mature_102_residues
MDFNVQRKCLETRLNALSSGMLAGQGLSALARDGVTIDDEVNLLTRQSKMTSLMGREVKAILTALDRMEAGEYGYCRICG
ADISSEHLSAHPESPFCEFCSA

Specific function: Unknown

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11105; Mature: 11105

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFNVQRKCLETRLNALSSGMLAGQGLSALARDGVTIDDEVNLLTRQSKMTSLMGREVKA
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ILTALDRMEAGEYGYCRICGADISSEHLSAHPESPFCEFCSA
HHHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCCCHHHHCCC
>Mature Secondary Structure
MDFNVQRKCLETRLNALSSGMLAGQGLSALARDGVTIDDEVNLLTRQSKMTSLMGREVKA
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ILTALDRMEAGEYGYCRICGADISSEHLSAHPESPFCEFCSA
HHHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA