Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is sgaA [H]

Identifier: 99081823

GI number: 99081823

Start: 2086629

End: 2087843

Strand: Reverse

Name: sgaA [H]

Synonym: TM1040_1983

Alternate gene names: 99081823

Gene position: 2087843-2086629 (Counterclockwise)

Preceding gene: 99081827

Following gene: 99081820

Centisome position: 65.23

GC content: 64.44

Gene sequence:

>1215_bases
ATGCGCGATTCCGTGAAACTCTCCTCTGGTCGGTCTTATCTGGCGATTCCCGGGCCTTCGGTGATGCCTGATCAGGTGTT
GCAGGCCATGCACCGCGCCTCGCCCAATATCTACGCGGGCGAACTGGTGGAGATGACCGGTACGCTGCCCGCGGATCTGC
GCCGCGTGGCGCGCACGCAGCATCATGTTGCGATCTACATCGCCAACGGTCACGGCGCCTGGGAAGCGGCGTTGTCCAAC
ACTTTGCAAGAAGGCGACAAGGTCCTGGTGCCCGCATCCGGACGGTTCGCCTATGGCTGGAGCGAAATGGCCGAAGCCCT
CGGGATCAACGTCGAGGTGATGGATTTTGGCCTGCAAGCGCCCTTTGATCTTGCGCGGGTGGCCGAGCGTCTGGCGGCGG
ACAAGGCGTATGAGATCAAGGCGGTTTTGGGCGTTCACACGGATACCTCGACGTCGATCCGGAATGATATCAATGGGTTG
CGCGCCGCCATGGATGAGGTGGGCCATCCGGCGCTGTTGATGGCGGATTGCATTGCGTCCCTGGGCTGTGACCGGTTCGA
GATGGATGCCTGGGGCGTCGATGTGATGGTGACGGGCTGTCAGAAAGGGCTGATGGTACCAGCGGGGATGTCGTTTGTGT
TCTTCAACGACAAGGCGGCAGAGGCCCGCGCGCGCCTGCCGCGGATCAGCCGCTACTGGGACTGGGTGCCGCGGGCCAAC
CCGGAGTATTTCTACCAGTTCTTTGGCGGCACCGCCCCGACGCATCATCTCTATGGTTTGCGGGCGGCGCTGGATCTGAT
CCATGCCGAAGGCATCGAGCAGATCTGGACCCGCCATGAGACTCTGGCCCGCGCGATCTGGGCCGCCTGTGACCGCTGGA
GCGAAGGCGGGGCGCTGGCGATGAACGTTGCCGATCCAGCGTTGCGCTCCCACGCGGTGACCGCGCTGCGCTTGCCGTCG
CCCCGCGCCACGGATCTGCGGGTCTGGCTGGAGGAAAACCTTGGCCTCACGCTCGGCATCGGTCTTGGCATGGCGCCGCC
GGACAGCGCAGAGTGGCACGGGTTCTTCCGGCTGGGCCATATGGGGCACGTCAATGGCCACATGATCATGGGGCTTTTAG
GAGGGATCGAGACCGGGCTTCGGGCGCTCGACATTCCGCATGGCGCAGGCGCGCTGGAGTCGGCGGCAAAGGTGCTGGCA
GGCGCGCCGTCCTGA

Upstream 100 bases:

>100_bases
CCTTGTCGGATGCTACGCTAGGCTGCGCGCAATTGAAAACTGTGTCGGGCCGAGATGGACCCATTAGGGACGGCCGGGGC
ACTCAGCAGGACAATTCCAC

Downstream 100 bases:

>100_bases
GATCGCGACAGGCGCATTCCGGACCGCATTCGGGAAAACGAGGGTTTTGATCTGGGTTTTAAAGCAGATTTGAGAGCCGG
TTGGAAAACGCGGGTTAGAA

Product: aminotransferase, class V

Products: NA

Alternate protein names: SGAT [H]

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MRDSVKLSSGRSYLAIPGPSVMPDQVLQAMHRASPNIYAGELVEMTGTLPADLRRVARTQHHVAIYIANGHGAWEAALSN
TLQEGDKVLVPASGRFAYGWSEMAEALGINVEVMDFGLQAPFDLARVAERLAADKAYEIKAVLGVHTDTSTSIRNDINGL
RAAMDEVGHPALLMADCIASLGCDRFEMDAWGVDVMVTGCQKGLMVPAGMSFVFFNDKAAEARARLPRISRYWDWVPRAN
PEYFYQFFGGTAPTHHLYGLRAALDLIHAEGIEQIWTRHETLARAIWAACDRWSEGGALAMNVADPALRSHAVTALRLPS
PRATDLRVWLEENLGLTLGIGLGMAPPDSAEWHGFFRLGHMGHVNGHMIMGLLGGIETGLRALDIPHGAGALESAAKVLA
GAPS

Sequences:

>Translated_404_residues
MRDSVKLSSGRSYLAIPGPSVMPDQVLQAMHRASPNIYAGELVEMTGTLPADLRRVARTQHHVAIYIANGHGAWEAALSN
TLQEGDKVLVPASGRFAYGWSEMAEALGINVEVMDFGLQAPFDLARVAERLAADKAYEIKAVLGVHTDTSTSIRNDINGL
RAAMDEVGHPALLMADCIASLGCDRFEMDAWGVDVMVTGCQKGLMVPAGMSFVFFNDKAAEARARLPRISRYWDWVPRAN
PEYFYQFFGGTAPTHHLYGLRAALDLIHAEGIEQIWTRHETLARAIWAACDRWSEGGALAMNVADPALRSHAVTALRLPS
PRATDLRVWLEENLGLTLGIGLGMAPPDSAEWHGFFRLGHMGHVNGHMIMGLLGGIETGLRALDIPHGAGALESAAKVLA
GAPS
>Mature_404_residues
MRDSVKLSSGRSYLAIPGPSVMPDQVLQAMHRASPNIYAGELVEMTGTLPADLRRVARTQHHVAIYIANGHGAWEAALSN
TLQEGDKVLVPASGRFAYGWSEMAEALGINVEVMDFGLQAPFDLARVAERLAADKAYEIKAVLGVHTDTSTSIRNDINGL
RAAMDEVGHPALLMADCIASLGCDRFEMDAWGVDVMVTGCQKGLMVPAGMSFVFFNDKAAEARARLPRISRYWDWVPRAN
PEYFYQFFGGTAPTHHLYGLRAALDLIHAEGIEQIWTRHETLARAIWAACDRWSEGGALAMNVADPALRSHAVTALRLPS
PRATDLRVWLEENLGLTLGIGLGMAPPDSAEWHGFFRLGHMGHVNGHMIMGLLGGIETGLRALDIPHGAGALESAAKVLA
GAPS

Specific function: Unknown

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=327, Percent_Identity=29.3577981651376, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17536281, Length=310, Percent_Identity=29.6774193548387, Blast_Score=109, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6321079, Length=373, Percent_Identity=24.9329758713137, Blast_Score=97, Evalue=5e-21,
Organism=Drosophila melanogaster, GI17530823, Length=320, Percent_Identity=27.1875, Blast_Score=96, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR020578
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: =2.6.1.45 [H]

Molecular weight: Translated: 43694; Mature: 43694

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDSVKLSSGRSYLAIPGPSVMPDQVLQAMHRASPNIYAGELVEMTGTLPADLRRVARTQ
CCCCEEECCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHCCC
HHVAIYIANGHGAWEAALSNTLQEGDKVLVPASGRFAYGWSEMAEALGINVEVMDFGLQA
CEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCEEECHHHHHHHHCCCEEEEECCCCC
PFDLARVAERLAADKAYEIKAVLGVHTDTSTSIRNDINGLRAAMDEVGHPALLMADCIAS
CHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LGCDRFEMDAWGVDVMVTGCQKGLMVPAGMSFVFFNDKAAEARARLPRISRYWDWVPRAN
CCCCCEEECCCCEEEEEECCCCCEEECCCCEEEEECCCHHHHHHHCCHHHHHHCCCCCCC
PEYFYQFFGGTAPTHHLYGLRAALDLIHAEGIEQIWTRHETLARAIWAACDRWSEGGALA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
MNVADPALRSHAVTALRLPSPRATDLRVWLEENLGLTLGIGLGMAPPDSAEWHGFFRLGH
EECCCHHHHHHCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEECC
MGHVNGHMIMGLLGGIETGLRALDIPHGAGALESAAKVLAGAPS
CCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MRDSVKLSSGRSYLAIPGPSVMPDQVLQAMHRASPNIYAGELVEMTGTLPADLRRVARTQ
CCCCEEECCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHCCC
HHVAIYIANGHGAWEAALSNTLQEGDKVLVPASGRFAYGWSEMAEALGINVEVMDFGLQA
CEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCEEECHHHHHHHHCCCEEEEECCCCC
PFDLARVAERLAADKAYEIKAVLGVHTDTSTSIRNDINGLRAAMDEVGHPALLMADCIAS
CHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LGCDRFEMDAWGVDVMVTGCQKGLMVPAGMSFVFFNDKAAEARARLPRISRYWDWVPRAN
CCCCCEEECCCCEEEEEECCCCCEEECCCCEEEEECCCHHHHHHHCCHHHHHHCCCCCCC
PEYFYQFFGGTAPTHHLYGLRAALDLIHAEGIEQIWTRHETLARAIWAACDRWSEGGALA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
MNVADPALRSHAVTALRLPSPRATDLRVWLEENLGLTLGIGLGMAPPDSAEWHGFFRLGH
EECCCHHHHHHCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEECC
MGHVNGHMIMGLLGGIETGLRALDIPHGAGALESAAKVLAGAPS
CCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8144463 [H]