Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081798

Identifier: 99081798

GI number: 99081798

Start: 2062849

End: 2063478

Strand: Reverse

Name: 99081798

Synonym: TM1040_1958

Alternate gene names: NA

Gene position: 2063478-2062849 (Counterclockwise)

Preceding gene: 99081800

Following gene: 99081797

Centisome position: 64.46

GC content: 57.14

Gene sequence:

>630_bases
ATGTGTGGCGCACCCAAAGCGGGAATAGTTTTAGCATTTTGCACTTTGGATTTGACGCCGATGTATTCCGAGACGCCGGA
TGGGCACGATGGGTCACCCACCGCAGATGTCCCGATGAGGGACAAAGTTCCCAATTGGGGCATTCTTCTTCTATTGCTCA
CAACTCCGCAGGTTATGACCTTCCTTCTGCCAGAGAGTATCCTCGCGCGGTTCTCTGGACCTCAATACCTGCGTGAAATC
TGGAGCATCGCGAGCTTTGTGACGATCATGGCGCTGAGCTCTGAAGGCTCGTGGAACGATCGCTTTTTGCGCGTGAACGC
CTGGGGCATACATTACGGGAGAACGTACTCGCGGGGGAGCGGCTGGGGTACATTTTGGGCGAGGAAGGAAGGGACGGTCA
ACGCGCTGCGCTGGGCGGATGTCGTGTCTGTCACCTACTTTCCAAAGAGTATGCTCACCGGATATGCGCGGCTGCGTGTG
CGGGCACAGGTGCCGCTGGGGGCGCGCTACGATCTGACCTTTAAAACTGTGTCCCTTGATCCGAAATGTGCAAACCCAGC
CGATCCTGAGGTCGCACGGGTACAGCTGGCTCTGGATCGGTACTGGCCTGAGTGGCGCGAGGGAAACTAG

Upstream 100 bases:

>100_bases
CGGGGTCGTCCCCTGCGAGGCGCAATCTGGGGGAGGGGGACGCCCGTTTCAAGGCCCTGTTTTGCTTTGCAGGGCGGCTA
TGTGCCTTGACAGGATGCCG

Downstream 100 bases:

>100_bases
CGCGCGGGGCGTTCACGCCTCTTTCACGGTTTCGCGAGACAACCGCCTGCATCTGTTTGAAAACGCCGACCTGAGCCCCA
CTTGCGAGTCTGGCAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MCGAPKAGIVLAFCTLDLTPMYSETPDGHDGSPTADVPMRDKVPNWGILLLLLTTPQVMTFLLPESILARFSGPQYLREI
WSIASFVTIMALSSEGSWNDRFLRVNAWGIHYGRTYSRGSGWGTFWARKEGTVNALRWADVVSVTYFPKSMLTGYARLRV
RAQVPLGARYDLTFKTVSLDPKCANPADPEVARVQLALDRYWPEWREGN

Sequences:

>Translated_209_residues
MCGAPKAGIVLAFCTLDLTPMYSETPDGHDGSPTADVPMRDKVPNWGILLLLLTTPQVMTFLLPESILARFSGPQYLREI
WSIASFVTIMALSSEGSWNDRFLRVNAWGIHYGRTYSRGSGWGTFWARKEGTVNALRWADVVSVTYFPKSMLTGYARLRV
RAQVPLGARYDLTFKTVSLDPKCANPADPEVARVQLALDRYWPEWREGN
>Mature_209_residues
MCGAPKAGIVLAFCTLDLTPMYSETPDGHDGSPTADVPMRDKVPNWGILLLLLTTPQVMTFLLPESILARFSGPQYLREI
WSIASFVTIMALSSEGSWNDRFLRVNAWGIHYGRTYSRGSGWGTFWARKEGTVNALRWADVVSVTYFPKSMLTGYARLRV
RAQVPLGARYDLTFKTVSLDPKCANPADPEVARVQLALDRYWPEWREGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23465; Mature: 23465

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGAPKAGIVLAFCTLDLTPMYSETPDGHDGSPTADVPMRDKVPNWGILLLLLTTPQVMT
CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHH
FLLPESILARFSGPQYLREIWSIASFVTIMALSSEGSWNDRFLRVNAWGIHYGRTYSRGS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEEEEEECCCEECCCC
GWGTFWARKEGTVNALRWADVVSVTYFPKSMLTGYARLRVRAQVPLGARYDLTFKTVSLD
CCEEEEECCCCCCCCEEHHHEEEEEECCHHHHHHEEEEEEEEECCCCCEEEEEEEEEECC
PKCANPADPEVARVQLALDRYWPEWREGN
CCCCCCCCCCHHHEEEEHHHCCCCCCCCC
>Mature Secondary Structure
MCGAPKAGIVLAFCTLDLTPMYSETPDGHDGSPTADVPMRDKVPNWGILLLLLTTPQVMT
CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHH
FLLPESILARFSGPQYLREIWSIASFVTIMALSSEGSWNDRFLRVNAWGIHYGRTYSRGS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEEEEEECCCEECCCC
GWGTFWARKEGTVNALRWADVVSVTYFPKSMLTGYARLRVRAQVPLGARYDLTFKTVSLD
CCEEEEECCCCCCCCEEHHHEEEEEECCHHHHHHEEEEEEEEECCCCCEEEEEEEEEECC
PKCANPADPEVARVQLALDRYWPEWREGN
CCCCCCCCCCHHHEEEEHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA