| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is gor [H]
Identifier: 99081797
GI number: 99081797
Start: 2061345
End: 2062700
Strand: Reverse
Name: gor [H]
Synonym: TM1040_1957
Alternate gene names: 99081797
Gene position: 2062700-2061345 (Counterclockwise)
Preceding gene: 99081798
Following gene: 99081796
Centisome position: 64.44
GC content: 60.32
Gene sequence:
>1356_bases ATGAGCTTTGATTACGATCTATTTGTCATTGGAGGTGGCTCCGGTGGGGTGCGCGCGGCGCGGGTTGCCGCGGCAGGCGG CGCATCGGTGGCGCTGGCCGAAGAGGACCGCTATGGCGGCACCTGCGTCATCCGGGGCTGTGTCCCCAAAAAGCTGATGG TCTTTGCGTCGGAATACTCCGGTATGGTCGAAGACGGCCGCGCCTATGGCTGGGATCTGGAGAACAAGGGCTTTGATTGG GATCACTTCAAGCAGAAGCTCAACACCGAGCTGGACCGCCTTGAGGGGATCTATCGCAACCTTCTGAAGAACTCCGGCGT GGAGAGCTTTGATGCGCGCGCCAAACTTGCCGATGCCCATACGGTTGAATTGTCGGACGGGACGCGCAAGACCGCCAAAC ACATCCTGATTGCCACCGGCGGCCGTCCTTGGGTGCCGGAGTTTCCGGGGTCGGAGCTGGCGATCACCTCGAACGAGATG TTCCATCTCGAGAAGCTCCCCGAGAGCATTCTCATCGTGGGGGGCGGCTATATTGCCTCAGAATTTGCGGGCATCATGAA TGGTCTTGGCGTCAAGACCACGCAGTACTACCGCGGCGCCCAGATCCTGCGTGGTTTTGATGACGAGGCACGCGGCCTTG TGGCGCAGGAGATGATCCAGTCCGGCATCGATCTCAAGCTCGGAACCAACGTGCTGGAGATGCGCCGCGAGGGCGACAAG ATCTGGGTCAAGGCCACCAATGGCGACGAGGGGCTGTTCGATCAGGTGATGTTTGCCACCGGACGCAAACCCAATGCCGA CAACCTCGGGCTGGAGGAGCTGGGCATCGCGCGTGGCAGGGGCGGCGAGATCGAGGTGGATCAATACAGCCAGACAGCTG TGCCGTCGGTCTATGCCATCGGCGATGTGACCGACCGGGTGAACCTCACACCGGTGGCGATCCGCGAGGGCATGGCCTTT GTGGAAACCGTGTTCAACGGCAACCCCACCAGCCCCGATCACGATCTGATCCCGACCGCTATTTTCACGCAGCCAGAGAT GGGCACCGTTGGCCTCAGCGAAGAAGAAGCGGCCAAACAGGAAACCATCGAGGTCTACGCGACCTCTTTCAAACCGATGC AGCAGAGCTTTGCCGGGCGGGCGCAGAGAGTGCTCATGAAGCTGATCGTGAGTCAGGCGACCCGCAAGGTGCTGGGCTGT CACATTGTCGCACCGGGCGCCGGTGAGATGATCCAATTGGCGGGGATTGCCGTAAAAATGGGGGCAACCAAGGAAGATTT CGACCGCACTGTTGCGGTTCACCCGACCATGTCGGAAGAATTGGTGACGCTAAAAACCCCTGTGCGGACGATCTGA
Upstream 100 bases:
>100_bases GCATCTGTTTGAAAACGCCGACCTGAGCCCCACTTGCGAGTCTGGCAATTCACCGCGCGCTGTGGGATACCTCGCGCAAG ATATAAGAAGGGCGACGCAT
Downstream 100 bases:
>100_bases ACCAATTTCAGAGTTTGGTCGCGACGCTGATCTTGAATTTCAGCGCCGTGACCACAGGTTACAGGGCAATATCCGCTGTA TCAGCGGGGAGAGATGGATA
Product: NADPH-glutathione reductase
Products: NA
Alternate protein names: GR; GRase [H]
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSFDYDLFVIGGGSGGVRAARVAAAGGASVALAEEDRYGGTCVIRGCVPKKLMVFASEYSGMVEDGRAYGWDLENKGFDW DHFKQKLNTELDRLEGIYRNLLKNSGVESFDARAKLADAHTVELSDGTRKTAKHILIATGGRPWVPEFPGSELAITSNEM FHLEKLPESILIVGGGYIASEFAGIMNGLGVKTTQYYRGAQILRGFDDEARGLVAQEMIQSGIDLKLGTNVLEMRREGDK IWVKATNGDEGLFDQVMFATGRKPNADNLGLEELGIARGRGGEIEVDQYSQTAVPSVYAIGDVTDRVNLTPVAIREGMAF VETVFNGNPTSPDHDLIPTAIFTQPEMGTVGLSEEEAAKQETIEVYATSFKPMQQSFAGRAQRVLMKLIVSQATRKVLGC HIVAPGAGEMIQLAGIAVKMGATKEDFDRTVAVHPTMSEELVTLKTPVRTI
Sequences:
>Translated_451_residues MSFDYDLFVIGGGSGGVRAARVAAAGGASVALAEEDRYGGTCVIRGCVPKKLMVFASEYSGMVEDGRAYGWDLENKGFDW DHFKQKLNTELDRLEGIYRNLLKNSGVESFDARAKLADAHTVELSDGTRKTAKHILIATGGRPWVPEFPGSELAITSNEM FHLEKLPESILIVGGGYIASEFAGIMNGLGVKTTQYYRGAQILRGFDDEARGLVAQEMIQSGIDLKLGTNVLEMRREGDK IWVKATNGDEGLFDQVMFATGRKPNADNLGLEELGIARGRGGEIEVDQYSQTAVPSVYAIGDVTDRVNLTPVAIREGMAF VETVFNGNPTSPDHDLIPTAIFTQPEMGTVGLSEEEAAKQETIEVYATSFKPMQQSFAGRAQRVLMKLIVSQATRKVLGC HIVAPGAGEMIQLAGIAVKMGATKEDFDRTVAVHPTMSEELVTLKTPVRTI >Mature_450_residues SFDYDLFVIGGGSGGVRAARVAAAGGASVALAEEDRYGGTCVIRGCVPKKLMVFASEYSGMVEDGRAYGWDLENKGFDWD HFKQKLNTELDRLEGIYRNLLKNSGVESFDARAKLADAHTVELSDGTRKTAKHILIATGGRPWVPEFPGSELAITSNEMF HLEKLPESILIVGGGYIASEFAGIMNGLGVKTTQYYRGAQILRGFDDEARGLVAQEMIQSGIDLKLGTNVLEMRREGDKI WVKATNGDEGLFDQVMFATGRKPNADNLGLEELGIARGRGGEIEVDQYSQTAVPSVYAIGDVTDRVNLTPVAIREGMAFV ETVFNGNPTSPDHDLIPTAIFTQPEMGTVGLSEEEAAKQETIEVYATSFKPMQQSFAGRAQRVLMKLIVSQATRKVLGCH IVAPGAGEMIQLAGIAVKMGATKEDFDRTVAVHPTMSEELVTLKTPVRTI
Specific function: Maintains High Levels Of Reduced Glutathione In The Cytosol. [C]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=460, Percent_Identity=40.6521739130435, Blast_Score=311, Evalue=9e-85, Organism=Homo sapiens, GI22035672, Length=476, Percent_Identity=38.4453781512605, Blast_Score=265, Evalue=8e-71, Organism=Homo sapiens, GI148277065, Length=434, Percent_Identity=33.8709677419355, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI33519430, Length=434, Percent_Identity=33.8709677419355, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI33519428, Length=434, Percent_Identity=33.8709677419355, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI33519426, Length=434, Percent_Identity=33.8709677419355, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI148277071, Length=434, Percent_Identity=33.8709677419355, Blast_Score=231, Evalue=7e-61, Organism=Homo sapiens, GI291045266, Length=476, Percent_Identity=34.0336134453782, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI91199540, Length=462, Percent_Identity=32.2510822510823, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI291045268, Length=473, Percent_Identity=31.5010570824524, Blast_Score=187, Evalue=1e-47, Organism=Escherichia coli, GI1789915, Length=431, Percent_Identity=38.9791183294664, Blast_Score=291, Evalue=7e-80, Organism=Escherichia coli, GI1786307, Length=452, Percent_Identity=29.2035398230088, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI87082354, Length=467, Percent_Identity=28.9079229122056, Blast_Score=156, Evalue=3e-39, Organism=Escherichia coli, GI87081717, Length=456, Percent_Identity=25.6578947368421, Blast_Score=131, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71983419, Length=453, Percent_Identity=38.6313465783664, Blast_Score=268, Evalue=3e-72, Organism=Caenorhabditis elegans, GI71983429, Length=453, Percent_Identity=38.6313465783664, Blast_Score=268, Evalue=4e-72, Organism=Caenorhabditis elegans, GI17557007, Length=477, Percent_Identity=33.9622641509434, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI71982272, Length=479, Percent_Identity=33.8204592901879, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI32565766, Length=454, Percent_Identity=31.057268722467, Blast_Score=188, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6325166, Length=461, Percent_Identity=37.527114967462, Blast_Score=284, Evalue=2e-77, Organism=Saccharomyces cerevisiae, GI6321091, Length=461, Percent_Identity=30.1518438177874, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6325240, Length=474, Percent_Identity=24.8945147679325, Blast_Score=134, Evalue=2e-32, Organism=Drosophila melanogaster, GI24640553, Length=476, Percent_Identity=36.1344537815126, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24640549, Length=476, Percent_Identity=36.1344537815126, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI24640551, Length=476, Percent_Identity=36.1344537815126, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI17737741, Length=478, Percent_Identity=33.8912133891213, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI21358499, Length=464, Percent_Identity=32.9741379310345, Blast_Score=214, Evalue=7e-56,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR006324 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.7 [H]
Molecular weight: Translated: 48852; Mature: 48721
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDYDLFVIGGGSGGVRAARVAAAGGASVALAEEDRYGGTCVIRGCVPKKLMVFASEYS CCCCEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHC GMVEDGRAYGWDLENKGFDWDHFKQKLNTELDRLEGIYRNLLKNSGVESFDARAKLADAH CCHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHECCCCE TVELSDGTRKTAKHILIATGGRPWVPEFPGSELAITSNEMFHLEKLPESILIVGGGYIAS EEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHCCCEEEEEECCHHHH EFAGIMNGLGVKTTQYYRGAQILRGFDDEARGLVAQEMIQSGIDLKLGTNVLEMRREGDK HHHHHHHCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCE IWVKATNGDEGLFDQVMFATGRKPNADNLGLEELGIARGRGGEIEVDQYSQTAVPSVYAI EEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCEEEE GDVTDRVNLTPVAIREGMAFVETVFNGNPTSPDHDLIPTAIFTQPEMGTVGLSEEEAAKQ CCCCCCCCCCHHHHHHCHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHH ETIEVYATSFKPMQQSFAGRAQRVLMKLIVSQATRKVLGCHIVAPGAGEMIQLAGIAVKM HEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEEEEE GATKEDFDRTVAVHPTMSEELVTLKTPVRTI CCCHHHHCCEEEECCCCCCCEEEECCCCCCC >Mature Secondary Structure SFDYDLFVIGGGSGGVRAARVAAAGGASVALAEEDRYGGTCVIRGCVPKKLMVFASEYS CCCEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHC GMVEDGRAYGWDLENKGFDWDHFKQKLNTELDRLEGIYRNLLKNSGVESFDARAKLADAH CCHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHECCCCE TVELSDGTRKTAKHILIATGGRPWVPEFPGSELAITSNEMFHLEKLPESILIVGGGYIAS EEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHCCCEEEEEECCHHHH EFAGIMNGLGVKTTQYYRGAQILRGFDDEARGLVAQEMIQSGIDLKLGTNVLEMRREGDK HHHHHHHCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCE IWVKATNGDEGLFDQVMFATGRKPNADNLGLEELGIARGRGGEIEVDQYSQTAVPSVYAI EEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCEEEE GDVTDRVNLTPVAIREGMAFVETVFNGNPTSPDHDLIPTAIFTQPEMGTVGLSEEEAAKQ CCCCCCCCCCHHHHHHCHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHH ETIEVYATSFKPMQQSFAGRAQRVLMKLIVSQATRKVLGCHIVAPGAGEMIQLAGIAVKM HEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEEEEE GATKEDFDRTVAVHPTMSEELVTLKTPVRTI CCCHHHHCCEEEECCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7538273 [H]