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The map label for this gene is yfbS [C]

Identifier: 99081740

GI number: 99081740

Start: 2000157

End: 2001935

Strand: Reverse

Name: yfbS [C]

Synonym: TM1040_1899

Alternate gene names: 99081740

Gene position: 2001935-2000157 (Counterclockwise)

Preceding gene: 99081742

Following gene: 99081739

Centisome position: 62.54

GC content: 62.45

Gene sequence:

>1779_bases
ATGTTTCTCTTTCAATCGGGTGACACCACAAGCGCCATTATCGCGTTGTTGATCGTTCTTGCGATGTTCGTGGCCTTTTT
GCGCGAAACCTATCCGACCGAGGTGGTGGCGATCTGTGGCGTCTCCTTGATGCTGATCACCGGGGTGCTGCCCTATGCCG
AGGCGCTGCCGGTGCTGGCGAACCCGGCGCCCTGGACCATTGCGGCGATGTTCCTCATCATGGGGGCCCTGGTGCGCACC
GGGGCGCTTGATGCCTTTACCTCTGTGGCCCGCAAAAAGGCCGAAGTGAGCCCGAAAATGGCAATCGCGCTCCTGATGGG
CTTTGTGGTGATCGCCTCGGCCTTTGTGTCCAACACGCCGGTGGTGGTGGTGATGATCCCGGTCTTTATCCAGATCTCGC
GCACGCTCAATGTTTCGCCCTCCAAGATGCTGATTCCGCTCTCTTATGCAGCGGTTCTGGGCGGCACGCTCACCTTGATC
GGGACCTCTACCAACCTGCTGGTCGATGGGGTGGCCCGCGCGCAGGGTCTTGCGCCATTCTCTATCTTCGAGGTCACGCC
CTTGGGCATCGTGGTTGTGGTCTGGGGGCTGATTTATCTGCGCTTTATCGCGCCGCGCCTGCTGCCGGAACGGGACAGTA
TGGCGATGATGCTCTCGGATCGCTCGAAGATGAAATTCTTTACCGAAGCGGTGATCCCGCCTGACAGCAACCTCATCGGC
CGCGAAGTCACGGGCGTGCAGCTCTTCAAACGCCCGGGCGTGCGGCTGATCGACGTGATCCGCGGCGATGACTCGCTGCG
GCGCAACCTGCAGGGCGTGGAGCTTCAGGTGGGCGACCGGGTTGTGCTGCGCACCCAGATGACAGAGCTTCTGAGCCTGC
AGCGCAACAAGGAGCTGAAGCGCGTCGATCAGGTCTCGGCTGTGGAAACCAAGACGGTCGAGGTGCTCATCACGCCTGGC
TGTCGCATGGTGGGGCGCAGCCTTGGGGCAATGCGCCTGCGTCGGCGTTATGGCGTCTATGTGCTGGCGGTACACCGGCG
CAACCAGAACATCGGCGTGCAGCTTGATGATCTGGTGGTGCGCGTGGGGGATACGCTGCTGCTGGAGGGCGCGCCGGGCG
ATATCCAGCGCCTTGCGGCAGAGACGGACATGGCCGATGTGTCCCAGCCCACGCAGCGTGCCTATCGCCGCAGCCACGCG
CCGGTTGCAGTGGCCGCCATGGTCGGCATCGTGATCGCCGCCGCCTTTGGTCTGGCACCGATCCTGATGCTGTCGATCCT
TGCGGTGGCGCTGGTGCTGGCGACCCGCTGTATCGACGCGGATGAGGCGTTTTCCTTTGTGGATGGGCGGCTTCTGGCGC
TGATCTTTTCCATGCTGGCCATTGGCGCGGCGCTTGAAAGCTCCGGCGCGGTCGAACTCATTGTCAACGCGATCTCCCCG
GCCTTGGTGGATCTGCCGCCCTTCTTTCTGGTCTGGGCGGTATATCTTCTGACGTCGGTGCTCACCGAGCTTGTGTCCAA
CAATGCCGTTGCCGTGGTGGTCACGCCGATTGCGGTGGGGCTGGCGCAGGCCATGGGGCTTGATCCGCGCCCGCTGGTGA
TAGCGGTGATGATTGCAGCCTCGGCCTCATTTGCCACGCCCATCGGCTATCAGACCAATATGCTGGTCTATGGTCCGGGG
GGCTACAAGTTCTCGGACTTCCTCCGGGTGGGCATTCCGCTCAATCTCTCGATGGGGCTTTTGGCCTCGGCCGTGATCCC
GCTGCTCTGGCCACTCTGA

Upstream 100 bases:

>100_bases
TACAATTGCTTGCTGCACGGCCTTTGATCGGTGAATATGTCCGTTGGCTGAAGCCTCGCCCCAAAATGCGGCGGGAGCAC
CCCAAACAGTGTGGATTTGA

Downstream 100 bases:

>100_bases
CATCGGGATGCGCGCCTTTTCGCGCATCCCACCTGCGTTGGATGCAATTCCCCTTGTGGTAGAGCGTCCCGCTTCCCACT
TTTGTTTTCGATAGAGACAG

Product: TrkA-C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 592

Protein sequence:

>592_residues
MFLFQSGDTTSAIIALLIVLAMFVAFLRETYPTEVVAICGVSLMLITGVLPYAEALPVLANPAPWTIAAMFLIMGALVRT
GALDAFTSVARKKAEVSPKMAIALLMGFVVIASAFVSNTPVVVVMIPVFIQISRTLNVSPSKMLIPLSYAAVLGGTLTLI
GTSTNLLVDGVARAQGLAPFSIFEVTPLGIVVVVWGLIYLRFIAPRLLPERDSMAMMLSDRSKMKFFTEAVIPPDSNLIG
REVTGVQLFKRPGVRLIDVIRGDDSLRRNLQGVELQVGDRVVLRTQMTELLSLQRNKELKRVDQVSAVETKTVEVLITPG
CRMVGRSLGAMRLRRRYGVYVLAVHRRNQNIGVQLDDLVVRVGDTLLLEGAPGDIQRLAAETDMADVSQPTQRAYRRSHA
PVAVAAMVGIVIAAAFGLAPILMLSILAVALVLATRCIDADEAFSFVDGRLLALIFSMLAIGAALESSGAVELIVNAISP
ALVDLPPFFLVWAVYLLTSVLTELVSNNAVAVVVTPIAVGLAQAMGLDPRPLVIAVMIAASASFATPIGYQTNMLVYGPG
GYKFSDFLRVGIPLNLSMGLLASAVIPLLWPL

Sequences:

>Translated_592_residues
MFLFQSGDTTSAIIALLIVLAMFVAFLRETYPTEVVAICGVSLMLITGVLPYAEALPVLANPAPWTIAAMFLIMGALVRT
GALDAFTSVARKKAEVSPKMAIALLMGFVVIASAFVSNTPVVVVMIPVFIQISRTLNVSPSKMLIPLSYAAVLGGTLTLI
GTSTNLLVDGVARAQGLAPFSIFEVTPLGIVVVVWGLIYLRFIAPRLLPERDSMAMMLSDRSKMKFFTEAVIPPDSNLIG
REVTGVQLFKRPGVRLIDVIRGDDSLRRNLQGVELQVGDRVVLRTQMTELLSLQRNKELKRVDQVSAVETKTVEVLITPG
CRMVGRSLGAMRLRRRYGVYVLAVHRRNQNIGVQLDDLVVRVGDTLLLEGAPGDIQRLAAETDMADVSQPTQRAYRRSHA
PVAVAAMVGIVIAAAFGLAPILMLSILAVALVLATRCIDADEAFSFVDGRLLALIFSMLAIGAALESSGAVELIVNAISP
ALVDLPPFFLVWAVYLLTSVLTELVSNNAVAVVVTPIAVGLAQAMGLDPRPLVIAVMIAASASFATPIGYQTNMLVYGPG
GYKFSDFLRVGIPLNLSMGLLASAVIPLLWPL
>Mature_592_residues
MFLFQSGDTTSAIIALLIVLAMFVAFLRETYPTEVVAICGVSLMLITGVLPYAEALPVLANPAPWTIAAMFLIMGALVRT
GALDAFTSVARKKAEVSPKMAIALLMGFVVIASAFVSNTPVVVVMIPVFIQISRTLNVSPSKMLIPLSYAAVLGGTLTLI
GTSTNLLVDGVARAQGLAPFSIFEVTPLGIVVVVWGLIYLRFIAPRLLPERDSMAMMLSDRSKMKFFTEAVIPPDSNLIG
REVTGVQLFKRPGVRLIDVIRGDDSLRRNLQGVELQVGDRVVLRTQMTELLSLQRNKELKRVDQVSAVETKTVEVLITPG
CRMVGRSLGAMRLRRRYGVYVLAVHRRNQNIGVQLDDLVVRVGDTLLLEGAPGDIQRLAAETDMADVSQPTQRAYRRSHA
PVAVAAMVGIVIAAAFGLAPILMLSILAVALVLATRCIDADEAFSFVDGRLLALIFSMLAIGAALESSGAVELIVNAISP
ALVDLPPFFLVWAVYLLTSVLTELVSNNAVAVVVTPIAVGLAQAMGLDPRPLVIAVMIAASASFATPIGYQTNMLVYGPG
GYKFSDFLRVGIPLNLSMGLLASAVIPLLWPL

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=578, Percent_Identity=29.9307958477509, Blast_Score=210, Evalue=3e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 63406; Mature: 63406

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLFQSGDTTSAIIALLIVLAMFVAFLRETYPTEVVAICGVSLMLITGVLPYAEALPVLA
CEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NPAPWTIAAMFLIMGALVRTGALDAFTSVARKKAEVSPKMAIALLMGFVVIASAFVSNTP
CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
VVVVMIPVFIQISRTLNVSPSKMLIPLSYAAVLGGTLTLIGTSTNLLVDGVARAQGLAPF
EEEEEHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCE
SIFEVTPLGIVVVVWGLIYLRFIAPRLLPERDSMAMMLSDRSKMKFFTEAVIPPDSNLIG
EEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCC
REVTGVQLFKRPGVRLIDVIRGDDSLRRNLQGVELQVGDRVVLRTQMTELLSLQRNKELK
CCCHHHHHHHCCCCEEEEEECCCHHHHHCCCCCEEEECCEEHHHHHHHHHHHHHHCHHHH
RVDQVSAVETKTVEVLITPGCRMVGRSLGAMRLRRRYGVYVLAVHRRNQNIGVQLDDLVV
HHHHHHHHCEEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEHHHHHH
RVGDTLLLEGAPGDIQRLAAETDMADVSQPTQRAYRRSHAPVAVAAMVGIVIAAAFGLAP
HCCCEEEEECCCCHHHHHHHHCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ILMLSILAVALVLATRCIDADEAFSFVDGRLLALIFSMLAIGAALESSGAVELIVNAISP
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCH
ALVDLPPFFLVWAVYLLTSVLTELVSNNAVAVVVTPIAVGLAQAMGLDPRPLVIAVMIAA
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHH
SASFATPIGYQTNMLVYGPGGYKFSDFLRVGIPLNLSMGLLASAVIPLLWPL
CCCCCCCCCCCCCEEEECCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFLFQSGDTTSAIIALLIVLAMFVAFLRETYPTEVVAICGVSLMLITGVLPYAEALPVLA
CEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NPAPWTIAAMFLIMGALVRTGALDAFTSVARKKAEVSPKMAIALLMGFVVIASAFVSNTP
CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
VVVVMIPVFIQISRTLNVSPSKMLIPLSYAAVLGGTLTLIGTSTNLLVDGVARAQGLAPF
EEEEEHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCE
SIFEVTPLGIVVVVWGLIYLRFIAPRLLPERDSMAMMLSDRSKMKFFTEAVIPPDSNLIG
EEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCC
REVTGVQLFKRPGVRLIDVIRGDDSLRRNLQGVELQVGDRVVLRTQMTELLSLQRNKELK
CCCHHHHHHHCCCCEEEEEECCCHHHHHCCCCCEEEECCEEHHHHHHHHHHHHHHCHHHH
RVDQVSAVETKTVEVLITPGCRMVGRSLGAMRLRRRYGVYVLAVHRRNQNIGVQLDDLVV
HHHHHHHHCEEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEHHHHHH
RVGDTLLLEGAPGDIQRLAAETDMADVSQPTQRAYRRSHAPVAVAAMVGIVIAAAFGLAP
HCCCEEEEECCCCHHHHHHHHCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ILMLSILAVALVLATRCIDADEAFSFVDGRLLALIFSMLAIGAALESSGAVELIVNAISP
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCH
ALVDLPPFFLVWAVYLLTSVLTELVSNNAVAVVVTPIAVGLAQAMGLDPRPLVIAVMIAA
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHH
SASFATPIGYQTNMLVYGPGGYKFSDFLRVGIPLNLSMGLLASAVIPLLWPL
CCCCCCCCCCCCCEEEECCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]