| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081739
Identifier: 99081739
GI number: 99081739
Start: 1999575
End: 2000039
Strand: Reverse
Name: 99081739
Synonym: TM1040_1898
Alternate gene names: NA
Gene position: 2000039-1999575 (Counterclockwise)
Preceding gene: 99081740
Following gene: 99081735
Centisome position: 62.48
GC content: 59.78
Gene sequence:
>465_bases ATGATGACAACCCGAAGAGCTTTTATCGCCGCCGTTCTGGTAGCAGCCTCCGCCATCGTGATGGGCGCGCAGACCCGCGC GACCGAGCCAGCCACTCCGCCGCTGACCGATACGCAATGGACCCTGAGCGAGATTGAGGGCAAAGCCCCGCTCGAAGGTC GTGATCTCGACCTCATCTTTTTTGAGGATGGTCGTTTTGGTACCAGCGCGGGCTGCAACCGGTTCATGGGCGAGGTGGAG ATCGAAGGCGATGAAATCACCTTTCCCGACAAGATCGCCGGCACCATGATGGCCTGCCCGGAGGGCCTTGCAGAACAGGA AGAAAAGCTGCTGTCGCTCCTTTCCGAGGTGACGCATTACCAGATCGAGCCAGACGCGCTGATCCTGATGGACAGCGACG GGCAGGCGCTTCTGCGTTACAGCCGAGAGGTCGAAGAAGAAGGTCTGGTTGAGACCAGTGGCTGA
Upstream 100 bases:
>100_bases TTTCGCGCATCCCACCTGCGTTGGATGCAATTCCCCTTGTGGTAGAGCGTCCCGCTTCCCACTTTTGTTTTCGATAGAGA CAGAATTGGGAATGGGACCC
Downstream 100 bases:
>100_bases TGTTGGCGGGCACATCCGAGACGAAATACCCCGGGGAGCGTTGGTCTCAGCGGTCCTCGCCCGTCCCTGATTTGGACCGC CAGCGCCGCCTCATCAGCGA
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: Conserved Domain Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MMTTRRAFIAAVLVAASAIVMGAQTRATEPATPPLTDTQWTLSEIEGKAPLEGRDLDLIFFEDGRFGTSAGCNRFMGEVE IEGDEITFPDKIAGTMMACPEGLAEQEEKLLSLLSEVTHYQIEPDALILMDSDGQALLRYSREVEEEGLVETSG
Sequences:
>Translated_154_residues MMTTRRAFIAAVLVAASAIVMGAQTRATEPATPPLTDTQWTLSEIEGKAPLEGRDLDLIFFEDGRFGTSAGCNRFMGEVE IEGDEITFPDKIAGTMMACPEGLAEQEEKLLSLLSEVTHYQIEPDALILMDSDGQALLRYSREVEEEGLVETSG >Mature_154_residues MMTTRRAFIAAVLVAASAIVMGAQTRATEPATPPLTDTQWTLSEIEGKAPLEGRDLDLIFFEDGRFGTSAGCNRFMGEVE IEGDEITFPDKIAGTMMACPEGLAEQEEKLLSLLSEVTHYQIEPDALILMDSDGQALLRYSREVEEEGLVETSG
Specific function: Unknown
COG id: COG3187
COG function: function code O; Heat shock protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16775; Mature: 16775
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTTRRAFIAAVLVAASAIVMGAQTRATEPATPPLTDTQWTLSEIEGKAPLEGRDLDLIF CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCEEEEE FEDGRFGTSAGCNRFMGEVEIEGDEITFPDKIAGTMMACPEGLAEQEEKLLSLLSEVTHY EECCCCCCCCCHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCE QIEPDALILMDSDGQALLRYSREVEEEGLVETSG EECCCEEEEECCCCHHHHHHHHHHHHCCCEECCC >Mature Secondary Structure MMTTRRAFIAAVLVAASAIVMGAQTRATEPATPPLTDTQWTLSEIEGKAPLEGRDLDLIF CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCEEEEE FEDGRFGTSAGCNRFMGEVEIEGDEITFPDKIAGTMMACPEGLAEQEEKLLSLLSEVTHY EECCCCCCCCCHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCE QIEPDALILMDSDGQALLRYSREVEEEGLVETSG EECCCEEEEECCCCHHHHHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA