Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081712

Identifier: 99081712

GI number: 99081712

Start: 1971641

End: 1971898

Strand: Reverse

Name: 99081712

Synonym: TM1040_1871

Alternate gene names: NA

Gene position: 1971898-1971641 (Counterclockwise)

Preceding gene: 99081713

Following gene: 99081711

Centisome position: 61.6

GC content: 60.08

Gene sequence:

>258_bases
TTGGGCTCAGACCGTCTCGGCTTCCTCGCTCCTATCCCCTGCGCGCAGCGCCTGCGCTTGCGACGACATATTTGTCCCGC
CAGCAGCGCGCAGATGCGCCCCGGATTTGCGCGAAAGCTCGCCTTTCACGCGGATGTGACGGGCGATCTCTCGCCCATGC
GGATGATATGTGCTCAACGGATCTGGACGATCTGCGTCGTATTGGCACATTTGCAGCCAAACGTGCTGAAAGACCCAAAG
GAGCATCCCGATGCGTAA

Upstream 100 bases:

>100_bases
TTGGACCGGCCTACGCAGCCTTTTCGTCCCTTCTGGCTGCTGTTCTGGCCCCAAAACCTGACTGGGCAGCTGTGCGCCCC
CCCGCGCCAGCTGCCCGCTT

Downstream 100 bases:

>100_bases
AACACTCATTTCTGCCCTGCTTGCGGGCACCGCGGCGCTTGCAGCCTGTGGCGACACCACCGGCGAACAAGTGCTCTATG
GTGCTGGGGCAGGGGCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MGSDRLGFLAPIPCAQRLRLRRHICPASSAQMRPGFARKLAFHADVTGDLSPMRMICAQRIWTICVVLAHLQPNVLKDPK
EHPDA

Sequences:

>Translated_85_residues
MGSDRLGFLAPIPCAQRLRLRRHICPASSAQMRPGFARKLAFHADVTGDLSPMRMICAQRIWTICVVLAHLQPNVLKDPK
EHPDA
>Mature_84_residues
GSDRLGFLAPIPCAQRLRLRRHICPASSAQMRPGFARKLAFHADVTGDLSPMRMICAQRIWTICVVLAHLQPNVLKDPKE
HPDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9500; Mature: 9369

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSDRLGFLAPIPCAQRLRLRRHICPASSAQMRPGFARKLAFHADVTGDLSPMRMICAQR
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH
IWTICVVLAHLQPNVLKDPKEHPDA
HHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GSDRLGFLAPIPCAQRLRLRRHICPASSAQMRPGFARKLAFHADVTGDLSPMRMICAQR
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH
IWTICVVLAHLQPNVLKDPKEHPDA
HHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA