| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081711
Identifier: 99081711
GI number: 99081711
Start: 1971445
End: 1971648
Strand: Reverse
Name: 99081711
Synonym: TM1040_1870
Alternate gene names: NA
Gene position: 1971648-1971445 (Counterclockwise)
Preceding gene: 99081712
Following gene: 99081710
Centisome position: 61.6
GC content: 65.2
Gene sequence:
>204_bases ATGCGTAAAACACTCATTTCTGCCCTGCTTGCGGGCACCGCGGCGCTTGCAGCCTGTGGCGACACCACCGGCGAACAAGT GCTCTATGGTGCTGGGGCAGGGGCCGCAGGGGCGGCCTTGCTCAACGGCAGCCTTGTCACCGGCGCGGCCGTTGGCGCTG CGGGCAACCTCATCTACTGCAAGGAAAACCCAGGCCGCTGCTAA
Upstream 100 bases:
>100_bases TCGCCCATGCGGATGATATGTGCTCAACGGATCTGGACGATCTGCGTCGTATTGGCACATTTGCAGCCAAACGTGCTGAA AGACCCAAAGGAGCATCCCG
Downstream 100 bases:
>100_bases TCCGGCCTCGGGCGCGCGGGCCTTCCGCGCCGCTATGACATCTCGCTTTGATGCGGGCGCACCGTCGCCACGGGACATCC CCGTGCGCGGCGGTTTTTTG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MRKTLISALLAGTAALAACGDTTGEQVLYGAGAGAAGAALLNGSLVTGAAVGAAGNLIYCKENPGRC
Sequences:
>Translated_67_residues MRKTLISALLAGTAALAACGDTTGEQVLYGAGAGAAGAALLNGSLVTGAAVGAAGNLIYCKENPGRC >Mature_67_residues MRKTLISALLAGTAALAACGDTTGEQVLYGAGAGAAGAALLNGSLVTGAAVGAAGNLIYCKENPGRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6338; Mature: 6338
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTLISALLAGTAALAACGDTTGEQVLYGAGAGAAGAALLNGSLVTGAAVGAAGNLIYC CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCEECCCCCCEEEE KENPGRC CCCCCCC >Mature Secondary Structure MRKTLISALLAGTAALAACGDTTGEQVLYGAGAGAAGAALLNGSLVTGAAVGAAGNLIYC CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCEECCCCCCEEEE KENPGRC CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA