Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081713

Identifier: 99081713

GI number: 99081713

Start: 1972185

End: 1972532

Strand: Reverse

Name: 99081713

Synonym: TM1040_1872

Alternate gene names: NA

Gene position: 1972532-1972185 (Counterclockwise)

Preceding gene: 99081714

Following gene: 99081712

Centisome position: 61.62

GC content: 61.49

Gene sequence:

>348_bases
ATGTTGAAACATCGCGGCTTTCCCGGCCGTTTACCCGGCACCGATTTCCAATTCGTCATCCGTCGCCCCAATCCCAAAGG
GGTCACGCCGATCACCCGGCGCGAACGCTTTCGGGACCGCAAGCCTGCCGATCGGCGTGCTGATGCGGGCTTTATGAAGG
CGCTGTGGGAGAATTTTGGCGATCAGCCGTTTGAGCGCGGCAATCTCGACGCAGGGCGGCTTAGCTGGCTCTTCGGGCGC
GAGGTGGTTGCGGTCGACGATCCCTTTGATCCCGAAAGCTATGAGTCGCTCCTGGTGATCGACGTTGAGGTGGCGCGGCG
TTCCTTCCCCGAGGCCTTTGAGGGGTAA

Upstream 100 bases:

>100_bases
AGAGCCGGTCTACACCGGCAAGTACAAGTAAACACTTCAGGGGTCCGGCCCTGTGGCCGGACCTTTCCGACCTGCGGGGT
GCCGGACCGGAGGCACTCTC

Downstream 100 bases:

>100_bases
ATGCTGCAAAAAGAGCGTCATATCACCGATACGGCTCCGTCAGGGCAGCGGAAATCCGCGTGCGGATGGACACGTCAGGC
GTGTGTCGGCGTCTTTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MLKHRGFPGRLPGTDFQFVIRRPNPKGVTPITRRERFRDRKPADRRADAGFMKALWENFGDQPFERGNLDAGRLSWLFGR
EVVAVDDPFDPESYESLLVIDVEVARRSFPEAFEG

Sequences:

>Translated_115_residues
MLKHRGFPGRLPGTDFQFVIRRPNPKGVTPITRRERFRDRKPADRRADAGFMKALWENFGDQPFERGNLDAGRLSWLFGR
EVVAVDDPFDPESYESLLVIDVEVARRSFPEAFEG
>Mature_115_residues
MLKHRGFPGRLPGTDFQFVIRRPNPKGVTPITRRERFRDRKPADRRADAGFMKALWENFGDQPFERGNLDAGRLSWLFGR
EVVAVDDPFDPESYESLLVIDVEVARRSFPEAFEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13295; Mature: 13295

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKHRGFPGRLPGTDFQFVIRRPNPKGVTPITRRERFRDRKPADRRADAGFMKALWENFG
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
DQPFERGNLDAGRLSWLFGREVVAVDDPFDPESYESLLVIDVEVARRSFPEAFEG
CCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCEEEEEEHHHHHCCCCCCCCC
>Mature Secondary Structure
MLKHRGFPGRLPGTDFQFVIRRPNPKGVTPITRRERFRDRKPADRRADAGFMKALWENFG
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
DQPFERGNLDAGRLSWLFGREVVAVDDPFDPESYESLLVIDVEVARRSFPEAFEG
CCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCEEEEEEHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA