Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is cvpA [C]

Identifier: 99081626

GI number: 99081626

Start: 1878733

End: 1879356

Strand: Direct

Name: cvpA [C]

Synonym: TM1040_1785

Alternate gene names: 99081626

Gene position: 1878733-1879356 (Clockwise)

Preceding gene: 99081625

Following gene: 99081627

Centisome position: 58.69

GC content: 57.37

Gene sequence:

>624_bases
TTGGCGAATATTTCGGAGCAGGCTAAAAGGCCACTCAAGTTATATTTCGCGGGCAAACAGGCGAGGGACATGGAAGGTTT
CACCATTATCGACGGCGCAGTGGCGCTGGTTATCGTTGTATCGGCGCTTCTTGCCTATGCACGCGGCTTTGTCCGCGAGG
TCATGGCCATCATCGGCTGGGTCGCCGCTGGTGTTCTCGCCTATATGTTCGCACCACAAGCAGAGCCTCTGATGGCTGAG
ATCCCTGTGGTGGGGGATTTCATCGCGGACAGCTGTGAGCTGTCGATGATCGCGGCATTCTTTGCCGTCTTTGCCATCGC
CCTGATCGTCGTGTCGTTCTTCACGCCGCTGCTGGCGGGGCTGGTGCAGCGTTCTGCACTGGGTGGTCTCGACAATGGCG
CTGGGTTCTTCTTTGGCGTCCTGCGCGGCATCCTGCTCGTAGTGATTGGCTTCTTTGTCTACAACGTCATCATGACCGGG
CAGAGCTTTACCATCGTGGATGAGAGCCGCTCGGCTGCGGTCTTCAACCAGGTCATCGGCAAGGTCGAAGAGCAAAACCC
CGAGCAAGCGCTGGGCTGGGTAACGCAGAAGTATGAAGAGTTGATCGCCTCCTGCGGTATCTGA

Upstream 100 bases:

>100_bases
CAAAAACTTGGTTTCACGGCAGCGATCGCTCCGAGCGGTGGCAAAACTGTTTCTGTCCCCGGCCTGACCCTGCGCCCGGC
CGCCGACCTCACAGGATTTG

Downstream 100 bases:

>100_bases
GAGACATCATCTACCGAGATTGAGAGGGCGTCCAATTCGGGCGCCCTTTTCATATTCGCGAAAGTGCATGCTGCCCTTTC
AGGGGACCGTTCAATCTGTT

Product: colicin V production protein

Products: NA

Alternate protein names: Colicin V Production Protein

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MANISEQAKRPLKLYFAGKQARDMEGFTIIDGAVALVIVVSALLAYARGFVREVMAIIGWVAAGVLAYMFAPQAEPLMAE
IPVVGDFIADSCELSMIAAFFAVFAIALIVVSFFTPLLAGLVQRSALGGLDNGAGFFFGVLRGILLVVIGFFVYNVIMTG
QSFTIVDESRSAAVFNQVIGKVEEQNPEQALGWVTQKYEELIASCGI

Sequences:

>Translated_207_residues
MANISEQAKRPLKLYFAGKQARDMEGFTIIDGAVALVIVVSALLAYARGFVREVMAIIGWVAAGVLAYMFAPQAEPLMAE
IPVVGDFIADSCELSMIAAFFAVFAIALIVVSFFTPLLAGLVQRSALGGLDNGAGFFFGVLRGILLVVIGFFVYNVIMTG
QSFTIVDESRSAAVFNQVIGKVEEQNPEQALGWVTQKYEELIASCGI
>Mature_206_residues
ANISEQAKRPLKLYFAGKQARDMEGFTIIDGAVALVIVVSALLAYARGFVREVMAIIGWVAAGVLAYMFAPQAEPLMAEI
PVVGDFIADSCELSMIAAFFAVFAIALIVVSFFTPLLAGLVQRSALGGLDNGAGFFFGVLRGILLVVIGFFVYNVIMTGQ
SFTIVDESRSAAVFNQVIGKVEEQNPEQALGWVTQKYEELIASCGI

Specific function: Required For Colicin V Production From Plasmid Incfi Colv3-K30. [C]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22201; Mature: 22070

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANISEQAKRPLKLYFAGKQARDMEGFTIIDGAVALVIVVSALLAYARGFVREVMAIIGW
CCCCCHHHCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAGVLAYMFAPQAEPLMAEIPVVGDFIADSCELSMIAAFFAVFAIALIVVSFFTPLLAG
HHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQRSALGGLDNGAGFFFGVLRGILLVVIGFFVYNVIMTGQSFTIVDESRSAAVFNQVIG
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
KVEEQNPEQALGWVTQKYEELIASCGI
HHHCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANISEQAKRPLKLYFAGKQARDMEGFTIIDGAVALVIVVSALLAYARGFVREVMAIIGW
CCCCHHHCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAGVLAYMFAPQAEPLMAEIPVVGDFIADSCELSMIAAFFAVFAIALIVVSFFTPLLAG
HHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQRSALGGLDNGAGFFFGVLRGILLVVIGFFVYNVIMTGQSFTIVDESRSAAVFNQVIG
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
KVEEQNPEQALGWVTQKYEELIASCGI
HHHCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA