Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081612

Identifier: 99081612

GI number: 99081612

Start: 1863225

End: 1864166

Strand: Direct

Name: 99081612

Synonym: TM1040_1771

Alternate gene names: NA

Gene position: 1863225-1864166 (Clockwise)

Preceding gene: 99081604

Following gene: 99081613

Centisome position: 58.21

GC content: 61.25

Gene sequence:

>942_bases
GTGACGGATTTTCTGTTTTACTCGAACGACTGCACGGACGGGAGTGATGTGCTCCTGGATGCGCTGGCGCAACGTGGTGG
GCTCAGCCATCTGCCGAACCCGGCCAAAGGGCGCGCCTATCAGATGGAGGCTCTGAAGGACTGCGCCCATCAGCCCGTGG
TCAAGCAGGCCGATTGGATATGGATTACGGATGTGGATGAGTTCCTCAACATCCATGTGGGCGATCACAGCATCCCTGCC
CTGATCGAGGCCTGCCACTCCCCGGCGGCGATCTCTGTGACGTTTCAATTCTTTGCCAACGCCGGAATCGAGAAATTTGA
AGATCGCCCGGTAATCGAGCAATTCACCCGGAGCCACAACCCGGACATCTGGTGCGGGGAAACCGCGATCGAAGTTAAGT
CCCTGACCCGGCGCGATTTTCCCTTGGGATACTACGGTGCCCACCGTCCCTTTGTCAGCAAGTCCGCCAAGACGCATCCG
CGCTGGTGCGATGGCAGCGGCAGGCAGGTCCCGCAAAAGTTTCTGACCGCCGCCAACCCGCGCCGGATCCGCAAGTTCCC
CGCCAAAGGCGCGCGGCAGCTCGCAACCCTCAATCACTATGCGCTGCGCTCACTCGACAGCTATCTGGTGAAGAACGACC
GCGGCGACGTGAACCGCGAAAACCGTGCCTTTGATGATACCTATTGGCGCGAGCGCAATGACCCGTCGTGGGAGGATCGC
TCGATCCTGCGGCTGCTGCCAAACCTGAAGGCCGCGCTTGCCGAGATGAAATCAGATCCCGAAATTGCCCGTCTGCACGA
CGCCTGCGTCGCCGCGCACCTCGCCCAACGCGATGCCCTGCTGGCGCAGCCCGCGTATCAGGCGATGCGCGCCCAGCTGC
AAAAAGCCTCTCCGCTGCCGCCGCAAGAAGAAGCGATGTTGATGCGGCTGGGTCTGATGTGA

Upstream 100 bases:

>100_bases
AGAACGAGGGACAGGACAGATGCGCATTACCGCAGTGACCTGCGTCAAGAATGAAGGTCCGTTTCTGTTGGAATGGATTG
CCTATCATCGCCTGATTGGC

Downstream 100 bases:

>100_bases
GGCGGAGGCGATGACTGTGGAGATCATCAATCTGGGACTGCCGAAATCCGGCACCACGACGCTCAAGGACGCGTTGACCC
GCGCGGGGTATTCCGTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTDFLFYSNDCTDGSDVLLDALAQRGGLSHLPNPAKGRAYQMEALKDCAHQPVVKQADWIWITDVDEFLNIHVGDHSIPA
LIEACHSPAAISVTFQFFANAGIEKFEDRPVIEQFTRSHNPDIWCGETAIEVKSLTRRDFPLGYYGAHRPFVSKSAKTHP
RWCDGSGRQVPQKFLTAANPRRIRKFPAKGARQLATLNHYALRSLDSYLVKNDRGDVNRENRAFDDTYWRERNDPSWEDR
SILRLLPNLKAALAEMKSDPEIARLHDACVAAHLAQRDALLAQPAYQAMRAQLQKASPLPPQEEAMLMRLGLM

Sequences:

>Translated_313_residues
MTDFLFYSNDCTDGSDVLLDALAQRGGLSHLPNPAKGRAYQMEALKDCAHQPVVKQADWIWITDVDEFLNIHVGDHSIPA
LIEACHSPAAISVTFQFFANAGIEKFEDRPVIEQFTRSHNPDIWCGETAIEVKSLTRRDFPLGYYGAHRPFVSKSAKTHP
RWCDGSGRQVPQKFLTAANPRRIRKFPAKGARQLATLNHYALRSLDSYLVKNDRGDVNRENRAFDDTYWRERNDPSWEDR
SILRLLPNLKAALAEMKSDPEIARLHDACVAAHLAQRDALLAQPAYQAMRAQLQKASPLPPQEEAMLMRLGLM
>Mature_312_residues
TDFLFYSNDCTDGSDVLLDALAQRGGLSHLPNPAKGRAYQMEALKDCAHQPVVKQADWIWITDVDEFLNIHVGDHSIPAL
IEACHSPAAISVTFQFFANAGIEKFEDRPVIEQFTRSHNPDIWCGETAIEVKSLTRRDFPLGYYGAHRPFVSKSAKTHPR
WCDGSGRQVPQKFLTAANPRRIRKFPAKGARQLATLNHYALRSLDSYLVKNDRGDVNRENRAFDDTYWRERNDPSWEDRS
ILRLLPNLKAALAEMKSDPEIARLHDACVAAHLAQRDALLAQPAYQAMRAQLQKASPLPPQEEAMLMRLGLM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35392; Mature: 35260

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFLFYSNDCTDGSDVLLDALAQRGGLSHLPNPAKGRAYQMEALKDCAHQPVVKQADWI
CCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCEE
WITDVDEFLNIHVGDHSIPALIEACHSPAAISVTFQFFANAGIEKFEDRPVIEQFTRSHN
EEECHHHHHEECCCCCHHHHHHHHHCCCCEEEEEHHHHHCCCHHHHCCCCHHHHHHHCCC
PDIWCGETAIEVKSLTRRDFPLGYYGAHRPFVSKSAKTHPRWCDGSGRQVPQKFLTAANP
CCEEECCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHCCCH
RRIRKFPAKGARQLATLNHYALRSLDSYLVKNDRGDVNRENRAFDDTYWRERNDPSWEDR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCHHHH
SILRLLPNLKAALAEMKSDPEIARLHDACVAAHLAQRDALLAQPAYQAMRAQLQKASPLP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PQEEAMLMRLGLM
CHHHHHHHHHCCC
>Mature Secondary Structure 
TDFLFYSNDCTDGSDVLLDALAQRGGLSHLPNPAKGRAYQMEALKDCAHQPVVKQADWI
CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCEE
WITDVDEFLNIHVGDHSIPALIEACHSPAAISVTFQFFANAGIEKFEDRPVIEQFTRSHN
EEECHHHHHEECCCCCHHHHHHHHHCCCCEEEEEHHHHHCCCHHHHCCCCHHHHHHHCCC
PDIWCGETAIEVKSLTRRDFPLGYYGAHRPFVSKSAKTHPRWCDGSGRQVPQKFLTAANP
CCEEECCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHCCCH
RRIRKFPAKGARQLATLNHYALRSLDSYLVKNDRGDVNRENRAFDDTYWRERNDPSWEDR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCHHHH
SILRLLPNLKAALAEMKSDPEIARLHDACVAAHLAQRDALLAQPAYQAMRAQLQKASPLP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PQEEAMLMRLGLM
CHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA