Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081489

Identifier: 99081489

GI number: 99081489

Start: 1752165

End: 1752485

Strand: Reverse

Name: 99081489

Synonym: TM1040_1648

Alternate gene names: NA

Gene position: 1752485-1752165 (Counterclockwise)

Preceding gene: 99081490

Following gene: 99081488

Centisome position: 54.75

GC content: 56.7

Gene sequence:

>321_bases
ATGCACAGAGGGGGGATTTCAGGAGTGTTCAAATTTCGCGGTCAGCGCGCGGATTTGGTTGGCGTCCATACAGTTCCACG
GATTGCCGAATTTCACGCGGTCATGCGACGCCTCCACAAGGCAAGCGTAGAGGTGCTTCCCGGCCTCTGTGGCCGCTCCC
CATTTGCAATCCATGACCTTGTTTCCATCACGGTCCAGGATGCGCTCCGGGATGTAGTCCCCAGCGACATACTGGCAGAC
GAGTTGCCACGGCATCGGGTAATCGTCGCTCAATTTTTCAAAGCGTTCTGCTGGTGTCATGTGGCCTCCGGGGGTTTTTA
G

Upstream 100 bases:

>100_bases
GCTTAAGTCGCTTCGGTGAATCTGGCACAACCTCAAAGACGAGAGCCCCGGTGAATGCCGGGGCTTTTTCGTTTCTTGAT
CCGCTCTTGATCGTGCGCTG

Downstream 100 bases:

>100_bases
GATTTCTTGGGGTCTACCCAATCGGTGCCCTTGTACCCGTAGGAGCAAGGCGCACCGCAACGGTAGCAGTGGGACTGTGG
CATGCCGGGATAGCCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MHRGGISGVFKFRGQRADLVGVHTVPRIAEFHAVMRRLHKASVEVLPGLCGRSPFAIHDLVSITVQDALRDVVPSDILAD
ELPRHRVIVAQFFKAFCWCHVASGGF

Sequences:

>Translated_106_residues
MHRGGISGVFKFRGQRADLVGVHTVPRIAEFHAVMRRLHKASVEVLPGLCGRSPFAIHDLVSITVQDALRDVVPSDILAD
ELPRHRVIVAQFFKAFCWCHVASGGF
>Mature_106_residues
MHRGGISGVFKFRGQRADLVGVHTVPRIAEFHAVMRRLHKASVEVLPGLCGRSPFAIHDLVSITVQDALRDVVPSDILAD
ELPRHRVIVAQFFKAFCWCHVASGGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11729; Mature: 11729

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRGGISGVFKFRGQRADLVGVHTVPRIAEFHAVMRRLHKASVEVLPGLCGRSPFAIHDL
CCCCCCCHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VSITVQDALRDVVPSDILADELPRHRVIVAQFFKAFCWCHVASGGF
HHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHRGGISGVFKFRGQRADLVGVHTVPRIAEFHAVMRRLHKASVEVLPGLCGRSPFAIHDL
CCCCCCCHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VSITVQDALRDVVPSDILADELPRHRVIVAQFFKAFCWCHVASGGF
HHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA