| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081468
Identifier: 99081468
GI number: 99081468
Start: 1734735
End: 1735055
Strand: Direct
Name: 99081468
Synonym: TM1040_1627
Alternate gene names: NA
Gene position: 1734735-1735055 (Clockwise)
Preceding gene: 99081459
Following gene: 99081469
Centisome position: 54.19
GC content: 56.7
Gene sequence:
>321_bases GTGGCAGGGTTTGCACAGGCACTGCAGGTTATTGAGATCCCAGAACAGATCTGGATCCCCATTGTGGCGACGAACGTGAT CACCGATGAGCTTCGATGTGTCAGCCTCAATCGCCCCACACATCTGGCAGGTGAAGAGATCACGCTCGAAGCACTGCATC CGCAGCCTGCTCCAGCGTGCCGTGCTGTACCATTTCCGCCATGCATGTTGCTGTCGGCGCGTCGTGTCAAAGTCGGTCTT CAGGGCCGCAATGCGCGGTTTCAATCCCTGAAGTCTTGGCTCCAGTCTCTTCAGCTTAGGCATCAGCGCCTCGAACTATG A
Upstream 100 bases:
>100_bases ATAGGCGCCGGTTTGGGTATTCCGCCCCCTGGAGGGATCAGCCCCCCCCTATGCCCCCGGCGATCCGCTCGGCGGCCTCA GTGCGCTGTTTCTCCCTGTC
Downstream 100 bases:
>100_bases TAGAGAAAGCCCGGCAGCGATGATCGCTCCGGGCACATTACAGGCGGGTCACTCTGAGCGTTTTTAACCAGAGTCCGCCG CCCACCTTCCGGGGCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MAGFAQALQVIEIPEQIWIPIVATNVITDELRCVSLNRPTHLAGEEITLEALHPQPAPACRAVPFPPCMLLSARRVKVGL QGRNARFQSLKSWLQSLQLRHQRLEL
Sequences:
>Translated_106_residues MAGFAQALQVIEIPEQIWIPIVATNVITDELRCVSLNRPTHLAGEEITLEALHPQPAPACRAVPFPPCMLLSARRVKVGL QGRNARFQSLKSWLQSLQLRHQRLEL >Mature_105_residues AGFAQALQVIEIPEQIWIPIVATNVITDELRCVSLNRPTHLAGEEITLEALHPQPAPACRAVPFPPCMLLSARRVKVGLQ GRNARFQSLKSWLQSLQLRHQRLEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11899; Mature: 11768
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGFAQALQVIEIPEQIWIPIVATNVITDELRCVSLNRPTHLAGEEITLEALHPQPAPAC CCCHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCCCCCCC RAVPFPPCMLLSARRVKVGLQGRNARFQSLKSWLQSLQLRHQRLEL CCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGFAQALQVIEIPEQIWIPIVATNVITDELRCVSLNRPTHLAGEEITLEALHPQPAPAC CCHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCCCCCCC RAVPFPPCMLLSARRVKVGLQGRNARFQSLKSWLQSLQLRHQRLEL CCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA