Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081468

Identifier: 99081468

GI number: 99081468

Start: 1734735

End: 1735055

Strand: Direct

Name: 99081468

Synonym: TM1040_1627

Alternate gene names: NA

Gene position: 1734735-1735055 (Clockwise)

Preceding gene: 99081459

Following gene: 99081469

Centisome position: 54.19

GC content: 56.7

Gene sequence:

>321_bases
GTGGCAGGGTTTGCACAGGCACTGCAGGTTATTGAGATCCCAGAACAGATCTGGATCCCCATTGTGGCGACGAACGTGAT
CACCGATGAGCTTCGATGTGTCAGCCTCAATCGCCCCACACATCTGGCAGGTGAAGAGATCACGCTCGAAGCACTGCATC
CGCAGCCTGCTCCAGCGTGCCGTGCTGTACCATTTCCGCCATGCATGTTGCTGTCGGCGCGTCGTGTCAAAGTCGGTCTT
CAGGGCCGCAATGCGCGGTTTCAATCCCTGAAGTCTTGGCTCCAGTCTCTTCAGCTTAGGCATCAGCGCCTCGAACTATG
A

Upstream 100 bases:

>100_bases
ATAGGCGCCGGTTTGGGTATTCCGCCCCCTGGAGGGATCAGCCCCCCCCTATGCCCCCGGCGATCCGCTCGGCGGCCTCA
GTGCGCTGTTTCTCCCTGTC

Downstream 100 bases:

>100_bases
TAGAGAAAGCCCGGCAGCGATGATCGCTCCGGGCACATTACAGGCGGGTCACTCTGAGCGTTTTTAACCAGAGTCCGCCG
CCCACCTTCCGGGGCGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MAGFAQALQVIEIPEQIWIPIVATNVITDELRCVSLNRPTHLAGEEITLEALHPQPAPACRAVPFPPCMLLSARRVKVGL
QGRNARFQSLKSWLQSLQLRHQRLEL

Sequences:

>Translated_106_residues
MAGFAQALQVIEIPEQIWIPIVATNVITDELRCVSLNRPTHLAGEEITLEALHPQPAPACRAVPFPPCMLLSARRVKVGL
QGRNARFQSLKSWLQSLQLRHQRLEL
>Mature_105_residues
AGFAQALQVIEIPEQIWIPIVATNVITDELRCVSLNRPTHLAGEEITLEALHPQPAPACRAVPFPPCMLLSARRVKVGLQ
GRNARFQSLKSWLQSLQLRHQRLEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11899; Mature: 11768

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFAQALQVIEIPEQIWIPIVATNVITDELRCVSLNRPTHLAGEEITLEALHPQPAPAC
CCCHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCCCCCCC
RAVPFPPCMLLSARRVKVGLQGRNARFQSLKSWLQSLQLRHQRLEL
CCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AGFAQALQVIEIPEQIWIPIVATNVITDELRCVSLNRPTHLAGEEITLEALHPQPAPAC
CCHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCCCCCCC
RAVPFPPCMLLSARRVKVGLQGRNARFQSLKSWLQSLQLRHQRLEL
CCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA