| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081469
Identifier: 99081469
GI number: 99081469
Start: 1735346
End: 1735738
Strand: Direct
Name: 99081469
Synonym: TM1040_1628
Alternate gene names: NA
Gene position: 1735346-1735738 (Clockwise)
Preceding gene: 99081468
Following gene: 99081477
Centisome position: 54.21
GC content: 60.81
Gene sequence:
>393_bases ATGGTGCCCGACGAAAGCGCCCGATTTGAACAGCGCAGCGTCACCACGTTGGATCGACTGGCGACGTCGACGCATACGCT CCTCTGCACGACGCGCCCGATCGGCGTCTTCATCAACCCGACGCATAGCATGAAGCGAACGCAGGTCGTTCGGGAGGATT ACGCCCCACGCGCCATCTGCACGCGTGAGCGCGCCCTGTATGAACGGGCAAGACAGAACCTCATGCGGCTTAGCTTCGCC GGGAAAGCGAGCGAACACATAGCCCGGCAGGTAACGACGATGGTATTCACGCGCCTTTCCAGCTCTCGTAGTACGGCGCG TAGTGACCGGGTGAAAGCCATAGACACCACGTCGACGAAGCCATGCCTCAGCCTGATCTTCCTTCTGCGGTAG
Upstream 100 bases:
>100_bases CAACAAGGTCATCTACCGATGTCGTCGTTAGCACCTCGCGCCCAAAGAGCTTGAAACTTACCTTGGCGCCATTGTCCGCG AGAACCTGGACTACTTCGCA
Downstream 100 bases:
>100_bases CACAAACAGTGCATGCCACCGTACCGCACCAGGCATACACAGGACGCTGCCTGCCACTGCCGAACGACCTGTCATGTTCA CCCTCATCATCATTTTCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MVPDESARFEQRSVTTLDRLATSTHTLLCTTRPIGVFINPTHSMKRTQVVREDYAPRAICTRERALYERARQNLMRLSFA GKASEHIARQVTTMVFTRLSSSRSTARSDRVKAIDTTSTKPCLSLIFLLR
Sequences:
>Translated_130_residues MVPDESARFEQRSVTTLDRLATSTHTLLCTTRPIGVFINPTHSMKRTQVVREDYAPRAICTRERALYERARQNLMRLSFA GKASEHIARQVTTMVFTRLSSSRSTARSDRVKAIDTTSTKPCLSLIFLLR >Mature_130_residues MVPDESARFEQRSVTTLDRLATSTHTLLCTTRPIGVFINPTHSMKRTQVVREDYAPRAICTRERALYERARQNLMRLSFA GKASEHIARQVTTMVFTRLSSSRSTARSDRVKAIDTTSTKPCLSLIFLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14803; Mature: 14803
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPDESARFEQRSVTTLDRLATSTHTLLCTTRPIGVFINPTHSMKRTQVVREDYAPRAIC CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCHHHH TRERALYERARQNLMRLSFAGKASEHIARQVTTMVFTRLSSSRSTARSDRVKAIDTTSTK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCH PCLSLIFLLR HHHHHHHHCC >Mature Secondary Structure MVPDESARFEQRSVTTLDRLATSTHTLLCTTRPIGVFINPTHSMKRTQVVREDYAPRAIC CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCHHHH TRERALYERARQNLMRLSFAGKASEHIARQVTTMVFTRLSSSRSTARSDRVKAIDTTSTK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCH PCLSLIFLLR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA