Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081459

Identifier: 99081459

GI number: 99081459

Start: 1726834

End: 1727211

Strand: Direct

Name: 99081459

Synonym: TM1040_1618

Alternate gene names: NA

Gene position: 1726834-1727211 (Clockwise)

Preceding gene: 99081441

Following gene: 99081468

Centisome position: 53.95

GC content: 57.67

Gene sequence:

>378_bases
GTGCTGACATCCCTAGATGGGGTGCTCCGAGGTTTCGACACTCAAGAAAACCCATTTACTGTCCGAGATCGCGTCAACCT
CAAGGACATTGTAACGCACGCCGGGGAGCGGATCCTGATCGTCGAGTCCTTCCGGAAGTCCTCGTTTCACCGTGCGCATA
CGGACGTTCTGAGCCAGAGACCGAGCGGTACCCAGTTTCCGGATCCGCACTCTGAAAACGGACCGACCCTGCAAGCGGGC
CGCGTCGACACTCTCGGATCCTCTCATGAACATGAACTCAGCGCGGCAGGTTCGGATCTCGGTCCAAACATCGATCGTAC
CACCCAGACCATCGGGATGTCCGGGAACGCGACGGTCAAACGCAACAAGCTCTTTTAG

Upstream 100 bases:

>100_bases
ACAGCGCGCGGCGTACAACGGCTTTCGATGTAGCCTTAGGCAGCGCAGCGAGCGCGTTATCGACCTCTCTTAGGCCTTCG
ACCTTGAACAAAGACTTCAT

Downstream 100 bases:

>100_bases
CCTGCCGGCTCCAGCTCTATTCTTCATGAGTCTCACCCTCTCACAAAGGAATGCGCCAGCGCGCCAAAAGAGCACCAACT
GGTGCCGGCCAGCCACTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MLTSLDGVLRGFDTQENPFTVRDRVNLKDIVTHAGERILIVESFRKSSFHRAHTDVLSQRPSGTQFPDPHSENGPTLQAG
RVDTLGSSHEHELSAAGSDLGPNIDRTTQTIGMSGNATVKRNKLF

Sequences:

>Translated_125_residues
MLTSLDGVLRGFDTQENPFTVRDRVNLKDIVTHAGERILIVESFRKSSFHRAHTDVLSQRPSGTQFPDPHSENGPTLQAG
RVDTLGSSHEHELSAAGSDLGPNIDRTTQTIGMSGNATVKRNKLF
>Mature_125_residues
MLTSLDGVLRGFDTQENPFTVRDRVNLKDIVTHAGERILIVESFRKSSFHRAHTDVLSQRPSGTQFPDPHSENGPTLQAG
RVDTLGSSHEHELSAAGSDLGPNIDRTTQTIGMSGNATVKRNKLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13695; Mature: 13695

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSLDGVLRGFDTQENPFTVRDRVNLKDIVTHAGERILIVESFRKSSFHRAHTDVLSQR
CCCCCCHHHHCCCCCCCCEEEECCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCC
PSGTQFPDPHSENGPTLQAGRVDTLGSSHEHELSAAGSDLGPNIDRTTQTIGMSGNATVK
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEECCCCCCEEE
RNKLF
CCCCC
>Mature Secondary Structure
MLTSLDGVLRGFDTQENPFTVRDRVNLKDIVTHAGERILIVESFRKSSFHRAHTDVLSQR
CCCCCCHHHHCCCCCCCCEEEECCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCC
PSGTQFPDPHSENGPTLQAGRVDTLGSSHEHELSAAGSDLGPNIDRTTQTIGMSGNATVK
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEECCCCCCEEE
RNKLF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA