| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is opgH [H]
Identifier: 99081376
GI number: 99081376
Start: 1640675
End: 1642567
Strand: Direct
Name: opgH [H]
Synonym: TM1040_1535
Alternate gene names: 99081376
Gene position: 1640675-1642567 (Clockwise)
Preceding gene: 99081375
Following gene: 99081379
Centisome position: 51.26
GC content: 62.92
Gene sequence:
>1893_bases ATGAAAGACATTGGTTTTACAGATACATCCGCGCTGTTGTTGCCACCAGAGGCTCCGCTGGCGATGCCGGCGCAGGACTT TGGACGCCAATTTCACGACGCCAGCGCGCCGGCTGCCTCCGCCCGGGATGGAACCGGCGCGGCGCTGTGGCGGGTGCTGG CGTTTTCGCCTGCCATGGTTGCAACTCTTGCGCTTGCGTGGGTGATGCAGGGCTGGTTTGCCGCAGATGGCACCACCTCG CTGGAGTGGGTGCTGTTGGTTCTGATTGCTTTCAACTTCTTCTGGATCACTTTCACGGTCTCGACCGTCCTGCTTGGACT GTTCAGCCTCTCGCGCACCCGTCCGCGCCCCGAACGCGGCCTGCGCAAACCAATGCGGGTGGCCCTCTTGGTGCCAATCT ACAACGAAGTGCCCTGGTATGTGCTTGGCAACGCGCGTTCCATGCTCGAGGAGCTGCGGGCCATCGGCGGGCCCCATCGC TACGAGATGTTCATTCTCTCGGACACCCGCGACCCAGAGATTGCCGCACAAGAGCTGCAGAGCATCAAGGCTTTACGCGC GGATTTGCCCGAGGGGATCACGCTCTATTATCGTCGGCGCGCCGAAAACACCGCCCGCAAGGTGGGCAATATCCATGATT GGGTGACCCGCTGGGGCGGCAGCTATGAGGCCATGTTGGTGCTGGATGCGGACAGCCTGATGACAGGCCGCGCCATCCAG CGCCTCACGGATGCACTGGCGCGGGACCCGGCTGCTGGTCTCATTCAGAGCTTCCCGCAACTTATTGGTGCACAATCCGT TTTTGGCCGCATGCAACAGTTTGCCAACGGCGTATACGGCCTCGCGCTGGCCGAGGGTCTGGCGCGTTGGACTGGTCATG AGGGCAATTACTGGGGCCACAACGCCATCATTCGCACCCGCGCCTTTGCCGCGTCGGCCGGGTTGCCGGAGCTGCGCGGG TTCACCGGAGGCAGCAGCCTCATCATGAGCCATGATTTTGTGGAGGCAGGCTTGTTGCGACGGGCTGGCTGGCGCGTGAG GTTCCTGCCCCGCATCCGCGGCTCCTACGAGGAAACACCGGCCACTCTGGTGGATCATATCCAGCGCGACCGGCGCTGGT GTCAGGGCAACCTGCAACACCTGCGTCTTTTGTCGGCAACCGGGTTTCACGCGATGTCGCGGTTCCACCTCGCGCATGGT GCCATCGGCTATCTGATGGCGCCGGTCTGGTTTGCGCTCTTGGTGATCTGGGCCGTGATCGGCCAGGACGAGGGCGGATC AGTGATCACCTACTTCTCCGAGGCAAACCCGCTGCGGCCCAACTGGCCGGATATGAGCGAGCCACGCCATGTGGCGGTGA TCGTCCTGATTTATGCCATGTTGCTCGCGCCCAAGGTCCTCTCTGTCGCGGCCCTGCCTCTGACCGGGCGGCGGATCGCG GATTATGGCGGTCTGGGGCGGTTCCTTCTGTCCATGCTCACCGAAATTTTGCTTGCGATCCTCTATGCGCCGATCCTGAT GGTTCAGCAGATGATTGCCGTGTTGCGCAGCGTCTTTGGCCTGCAAAAAGGCTGGTCCCCGCAGGCGCGCGCAGGTGGTG AGTATAGTCTTGCAACCCTGTGCAAGTGCCACCTTCTAGAGACCGTGAGTGGCATCGCGCTCTGCATCGGGATTGCTGCG GGCCTGGTGTCACTCTGGCTGTTGCCAATCGCACTGTCACTTGTGCTGGCCGTGCCGCTCTCTGCGATGTCGGGCCTGCG CCTGCCGCGGGGCTGGATGGGCACGGCCGAGACCTTGAACGAGCCGCAGATCAACCGCGCGGCCCATCACTACCGCAATC TGTTGCGGCAACACGCGCAAGGGACCGACGTGCCCGTGCAGGCCGCGGAGTGA
Upstream 100 bases:
>100_bases CTTTGATCCGGGCGAGCAAACCCATGTGGAACTGCGCGCGCAACTGCGCAAGGATGGGCAGGATGCTTCTGAGGTCTGGC TGTATCGGTGGACCGTCTGA
Downstream 100 bases:
>100_bases GAGGTTCCGTGGCGTTTGCGGGGGCTCTGCCCCCGCACCCCCGGGATATTTTTCGTTAGAAGAAAAGAGGCGTCAGCCAC CGGTCTGTGTATCAGCCACC
Product: glucosyltransferase MdoH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MKDIGFTDTSALLLPPEAPLAMPAQDFGRQFHDASAPAASARDGTGAALWRVLAFSPAMVATLALAWVMQGWFAADGTTS LEWVLLVLIAFNFFWITFTVSTVLLGLFSLSRTRPRPERGLRKPMRVALLVPIYNEVPWYVLGNARSMLEELRAIGGPHR YEMFILSDTRDPEIAAQELQSIKALRADLPEGITLYYRRRAENTARKVGNIHDWVTRWGGSYEAMLVLDADSLMTGRAIQ RLTDALARDPAAGLIQSFPQLIGAQSVFGRMQQFANGVYGLALAEGLARWTGHEGNYWGHNAIIRTRAFAASAGLPELRG FTGGSSLIMSHDFVEAGLLRRAGWRVRFLPRIRGSYEETPATLVDHIQRDRRWCQGNLQHLRLLSATGFHAMSRFHLAHG AIGYLMAPVWFALLVIWAVIGQDEGGSVITYFSEANPLRPNWPDMSEPRHVAVIVLIYAMLLAPKVLSVAALPLTGRRIA DYGGLGRFLLSMLTEILLAILYAPILMVQQMIAVLRSVFGLQKGWSPQARAGGEYSLATLCKCHLLETVSGIALCIGIAA GLVSLWLLPIALSLVLAVPLSAMSGLRLPRGWMGTAETLNEPQINRAAHHYRNLLRQHAQGTDVPVQAAE
Sequences:
>Translated_630_residues MKDIGFTDTSALLLPPEAPLAMPAQDFGRQFHDASAPAASARDGTGAALWRVLAFSPAMVATLALAWVMQGWFAADGTTS LEWVLLVLIAFNFFWITFTVSTVLLGLFSLSRTRPRPERGLRKPMRVALLVPIYNEVPWYVLGNARSMLEELRAIGGPHR YEMFILSDTRDPEIAAQELQSIKALRADLPEGITLYYRRRAENTARKVGNIHDWVTRWGGSYEAMLVLDADSLMTGRAIQ RLTDALARDPAAGLIQSFPQLIGAQSVFGRMQQFANGVYGLALAEGLARWTGHEGNYWGHNAIIRTRAFAASAGLPELRG FTGGSSLIMSHDFVEAGLLRRAGWRVRFLPRIRGSYEETPATLVDHIQRDRRWCQGNLQHLRLLSATGFHAMSRFHLAHG AIGYLMAPVWFALLVIWAVIGQDEGGSVITYFSEANPLRPNWPDMSEPRHVAVIVLIYAMLLAPKVLSVAALPLTGRRIA DYGGLGRFLLSMLTEILLAILYAPILMVQQMIAVLRSVFGLQKGWSPQARAGGEYSLATLCKCHLLETVSGIALCIGIAA GLVSLWLLPIALSLVLAVPLSAMSGLRLPRGWMGTAETLNEPQINRAAHHYRNLLRQHAQGTDVPVQAAE >Mature_630_residues MKDIGFTDTSALLLPPEAPLAMPAQDFGRQFHDASAPAASARDGTGAALWRVLAFSPAMVATLALAWVMQGWFAADGTTS LEWVLLVLIAFNFFWITFTVSTVLLGLFSLSRTRPRPERGLRKPMRVALLVPIYNEVPWYVLGNARSMLEELRAIGGPHR YEMFILSDTRDPEIAAQELQSIKALRADLPEGITLYYRRRAENTARKVGNIHDWVTRWGGSYEAMLVLDADSLMTGRAIQ RLTDALARDPAAGLIQSFPQLIGAQSVFGRMQQFANGVYGLALAEGLARWTGHEGNYWGHNAIIRTRAFAASAGLPELRG FTGGSSLIMSHDFVEAGLLRRAGWRVRFLPRIRGSYEETPATLVDHIQRDRRWCQGNLQHLRLLSATGFHAMSRFHLAHG AIGYLMAPVWFALLVIWAVIGQDEGGSVITYFSEANPLRPNWPDMSEPRHVAVIVLIYAMLLAPKVLSVAALPLTGRRIA DYGGLGRFLLSMLTEILLAILYAPILMVQQMIAVLRSVFGLQKGWSPQARAGGEYSLATLCKCHLLETVSGIALCIGIAA GLVSLWLLPIALSLVLAVPLSAMSGLRLPRGWMGTAETLNEPQINRAAHHYRNLLRQHAQGTDVPVQAAE
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG2943
COG function: function code M; Membrane glycosyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787287, Length=551, Percent_Identity=34.3012704174229, Blast_Score=295, Evalue=5e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 69312; Mature: 69312
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIGFTDTSALLLPPEAPLAMPAQDFGRQFHDASAPAASARDGTGAALWRVLAFSPAMV CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHH ATLALAWVMQGWFAADGTTSLEWVLLVLIAFNFFWITFTVSTVLLGLFSLSRTRPRPERG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LRKPMRVALLVPIYNEVPWYVLGNARSMLEELRAIGGPHRYEMFILSDTRDPEIAAQELQ HCCHHHEEEEEEHHCCCCCEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHH SIKALRADLPEGITLYYRRRAENTARKVGNIHDWVTRWGGSYEAMLVLDADSLMTGRAIQ HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEECHHHHHHHHHH RLTDALARDPAAGLIQSFPQLIGAQSVFGRMQQFANGVYGLALAEGLARWTGHEGNYWGH HHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC NAIIRTRAFAASAGLPELRGFTGGSSLIMSHDFVEAGLLRRAGWRVRFLPRIRGSYEETP CHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCCCCH ATLVDHIQRDRRWCQGNLQHLRLLSATGFHAMSRFHLAHGAIGYLMAPVWFALLVIWAVI HHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQDEGGSVITYFSEANPLRPNWPDMSEPRHVAVIVLIYAMLLAPKVLSVAALPLTGRRIA CCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH DYGGLGRFLLSMLTEILLAILYAPILMVQQMIAVLRSVFGLQKGWSPQARAGGEYSLATL HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH CKCHLLETVSGIALCIGIAAGLVSLWLLPIALSLVLAVPLSAMSGLRLPRGWMGTAETLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC EPQINRAAHHYRNLLRQHAQGTDVPVQAAE CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKDIGFTDTSALLLPPEAPLAMPAQDFGRQFHDASAPAASARDGTGAALWRVLAFSPAMV CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHH ATLALAWVMQGWFAADGTTSLEWVLLVLIAFNFFWITFTVSTVLLGLFSLSRTRPRPERG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LRKPMRVALLVPIYNEVPWYVLGNARSMLEELRAIGGPHRYEMFILSDTRDPEIAAQELQ HCCHHHEEEEEEHHCCCCCEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHH SIKALRADLPEGITLYYRRRAENTARKVGNIHDWVTRWGGSYEAMLVLDADSLMTGRAIQ HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEECHHHHHHHHHH RLTDALARDPAAGLIQSFPQLIGAQSVFGRMQQFANGVYGLALAEGLARWTGHEGNYWGH HHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC NAIIRTRAFAASAGLPELRGFTGGSSLIMSHDFVEAGLLRRAGWRVRFLPRIRGSYEETP CHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCCCCH ATLVDHIQRDRRWCQGNLQHLRLLSATGFHAMSRFHLAHGAIGYLMAPVWFALLVIWAVI HHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQDEGGSVITYFSEANPLRPNWPDMSEPRHVAVIVLIYAMLLAPKVLSVAALPLTGRRIA CCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH DYGGLGRFLLSMLTEILLAILYAPILMVQQMIAVLRSVFGLQKGWSPQARAGGEYSLATL HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH CKCHLLETVSGIALCIGIAAGLVSLWLLPIALSLVLAVPLSAMSGLRLPRGWMGTAETLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC EPQINRAAHHYRNLLRQHAQGTDVPVQAAE CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA