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The map label for this gene is amaB [H]

Identifier: 99081339

GI number: 99081339

Start: 1603637

End: 1604887

Strand: Reverse

Name: amaB [H]

Synonym: TM1040_1498

Alternate gene names: 99081339

Gene position: 1604887-1603637 (Counterclockwise)

Preceding gene: 99081341

Following gene: 99081338

Centisome position: 50.14

GC content: 60.59

Gene sequence:

>1251_bases
ATGACGGCGCTTGGACAGAATCTGAAAATCAATGGCGATCGGCTGTGGGACAGTCTGATGGATATGGCCAAGATTGGCCC
CGGTGTGGCCGGTGGCAACAATCGCCAGACGCTCACCGATGAGGACGCCGAAGGCCGCGCCCTGTTTCAGTCGTGGTGTG
AAGCGGCGGGCATGACCATGGGGCTCGACTCCATGGGCAATATGTTTGCAACCCGCCCGGGTGAAGATCCCGAGGCATTG
CCGGTCTACATGGGATCGCATCTCGACACCCAGCCGACGGGCGGCAAATACGATGGCGTTCTAGGGGTGCTTGGCGGTCT
TGAGGTCGTGCGGACCATGAATGACCTCGGCATCAAGACCAAGCACCCGATCGTGGTGACCAACTGGACCAATGAGGAAG
GCACGCGGTTTGCTCCGGCTATGCTGGCGTCGGGCGTGTTTGCCGGCAAACATACGCAAGACTGGGCCTATGGGCGCGAG
GATGCTGAAGGCAAGACCTTTGGCGACGAGCTGAAGCGCATCGGCTGGGTTGGCGATGAAGAGGTCGGCGCCCGCAAGAT
GCACGCCATGTTTGAGCTGCACATCGAGCAGGGTCCGATTCTTGAGGCTGAGAAGAAAGACATTGGCGTGGTGACACACG
GTCAGGGGCTCTGGTGGTTGCAATGTACCGTGACCGGCAAGGATGCGCACACTGGCTCGACCCCGATGAATATGCGGGTG
AACGCCGGGCTCGGCATGGCGCGGATGACGGAAGCGGCGCATCAGATCGCCATGGCGCATCAGCCGCATGCAGTGGGCGC
AGTGGGGCATTGCGATGTCTTCCCCAACTCGCGCAATGTGATCCCGGGCAAGGTGGTGTTCACCGTGGATTTCCGCTCTC
CCGACCTTGAAAAGCTGACATCGATGCGCACGCAATACGAAGCCAAAGCAAAGGAAATCGCGGCGGAGCTCGGTCTCGGT
CTGGAGATCGAGCCGGTGGGGCATTTCGACCCGGTGACCTTTGATGAGAGCTGCGTGAGTGCGGTTCGGGGCGCGGCAGA
GCGTTTGGGCTATAGCCACATGGATATCGTCTCTGGCGCGGGGCATGATGCCTGCTGGATCAATGATGTGGCACCCACCG
CGATGATCATGTGTCCTTGCGTGGACGGTCTGAGCCATAATGAGGCGGAAGAGATTTCGAAGGACTGGGCCGCGGCCGGC
ACGGATGTGATGCTGCATGCGGTGCTTGAGACGGCTGAGATCGTCGCCTGA

Upstream 100 bases:

>100_bases
GGCAGAAAAAAGAGCCACTGACCCGGGCGGAGCCAACCGCGCGTGACCTTGCCCCGCTCTTCGCGGGCAGGGCGGACTAC
AGGGAAGGAAGCAAAGAGAC

Downstream 100 bases:

>100_bases
CAACAAGAGGGGGCTCTGCCCCCGTCGCGGTTCCCGCGACTCCCCCGGGATATTTGGAGTTAGAAGAAACTCTGCCGGGA
GCTCAATAACAAAACGGCGC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MTALGQNLKINGDRLWDSLMDMAKIGPGVAGGNNRQTLTDEDAEGRALFQSWCEAAGMTMGLDSMGNMFATRPGEDPEAL
PVYMGSHLDTQPTGGKYDGVLGVLGGLEVVRTMNDLGIKTKHPIVVTNWTNEEGTRFAPAMLASGVFAGKHTQDWAYGRE
DAEGKTFGDELKRIGWVGDEEVGARKMHAMFELHIEQGPILEAEKKDIGVVTHGQGLWWLQCTVTGKDAHTGSTPMNMRV
NAGLGMARMTEAAHQIAMAHQPHAVGAVGHCDVFPNSRNVIPGKVVFTVDFRSPDLEKLTSMRTQYEAKAKEIAAELGLG
LEIEPVGHFDPVTFDESCVSAVRGAAERLGYSHMDIVSGAGHDACWINDVAPTAMIMCPCVDGLSHNEAEEISKDWAAAG
TDVMLHAVLETAEIVA

Sequences:

>Translated_416_residues
MTALGQNLKINGDRLWDSLMDMAKIGPGVAGGNNRQTLTDEDAEGRALFQSWCEAAGMTMGLDSMGNMFATRPGEDPEAL
PVYMGSHLDTQPTGGKYDGVLGVLGGLEVVRTMNDLGIKTKHPIVVTNWTNEEGTRFAPAMLASGVFAGKHTQDWAYGRE
DAEGKTFGDELKRIGWVGDEEVGARKMHAMFELHIEQGPILEAEKKDIGVVTHGQGLWWLQCTVTGKDAHTGSTPMNMRV
NAGLGMARMTEAAHQIAMAHQPHAVGAVGHCDVFPNSRNVIPGKVVFTVDFRSPDLEKLTSMRTQYEAKAKEIAAELGLG
LEIEPVGHFDPVTFDESCVSAVRGAAERLGYSHMDIVSGAGHDACWINDVAPTAMIMCPCVDGLSHNEAEEISKDWAAAG
TDVMLHAVLETAEIVA
>Mature_415_residues
TALGQNLKINGDRLWDSLMDMAKIGPGVAGGNNRQTLTDEDAEGRALFQSWCEAAGMTMGLDSMGNMFATRPGEDPEALP
VYMGSHLDTQPTGGKYDGVLGVLGGLEVVRTMNDLGIKTKHPIVVTNWTNEEGTRFAPAMLASGVFAGKHTQDWAYGRED
AEGKTFGDELKRIGWVGDEEVGARKMHAMFELHIEQGPILEAEKKDIGVVTHGQGLWWLQCTVTGKDAHTGSTPMNMRVN
AGLGMARMTEAAHQIAMAHQPHAVGAVGHCDVFPNSRNVIPGKVVFTVDFRSPDLEKLTSMRTQYEAKAKEIAAELGLGL
EIEPVGHFDPVTFDESCVSAVRGAAERLGYSHMDIVSGAGHDACWINDVAPTAMIMCPCVDGLSHNEAEEISKDWAAAGT
DVMLHAVLETAEIVA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=396, Percent_Identity=29.5454545454545, Blast_Score=163, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44728; Mature: 44597

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALGQNLKINGDRLWDSLMDMAKIGPGVAGGNNRQTLTDEDAEGRALFQSWCEAAGMTM
CCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE
GLDSMGNMFATRPGEDPEALPVYMGSHLDTQPTGGKYDGVLGVLGGLEVVRTMNDLGIKT
CHHHHCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
KHPIVVTNWTNEEGTRFAPAMLASGVFAGKHTQDWAYGREDAEGKTFGDELKRIGWVGDE
CCCEEEEECCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCH
EVGARKMHAMFELHIEQGPILEAEKKDIGVVTHGQGLWWLQCTVTGKDAHTGSTPMNMRV
HHHHHHHHHHHEEEECCCCCCCCCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCCEEEE
NAGLGMARMTEAAHQIAMAHQPHAVGAVGHCDVFPNSRNVIPGKVVFTVDFRSPDLEKLT
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHHH
SMRTQYEAKAKEIAAELGLGLEIEPVGHFDPVTFDESCVSAVRGAAERLGYSHMDIVSGA
HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCC
GHDACWINDVAPTAMIMCPCVDGLSHNEAEEISKDWAAAGTDVMLHAVLETAEIVA
CCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TALGQNLKINGDRLWDSLMDMAKIGPGVAGGNNRQTLTDEDAEGRALFQSWCEAAGMTM
CCCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE
GLDSMGNMFATRPGEDPEALPVYMGSHLDTQPTGGKYDGVLGVLGGLEVVRTMNDLGIKT
CHHHHCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
KHPIVVTNWTNEEGTRFAPAMLASGVFAGKHTQDWAYGREDAEGKTFGDELKRIGWVGDE
CCCEEEEECCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCH
EVGARKMHAMFELHIEQGPILEAEKKDIGVVTHGQGLWWLQCTVTGKDAHTGSTPMNMRV
HHHHHHHHHHHEEEECCCCCCCCCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCCEEEE
NAGLGMARMTEAAHQIAMAHQPHAVGAVGHCDVFPNSRNVIPGKVVFTVDFRSPDLEKLT
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHHH
SMRTQYEAKAKEIAAELGLGLEIEPVGHFDPVTFDESCVSAVRGAAERLGYSHMDIVSGA
HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCC
GHDACWINDVAPTAMIMCPCVDGLSHNEAEEISKDWAAAGTDVMLHAVLETAEIVA
CCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]