Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081193

Identifier: 99081193

GI number: 99081193

Start: 1442665

End: 1443237

Strand: Direct

Name: 99081193

Synonym: TM1040_1352

Alternate gene names: NA

Gene position: 1442665-1443237 (Clockwise)

Preceding gene: 99081192

Following gene: 99081195

Centisome position: 45.07

GC content: 60.73

Gene sequence:

>573_bases
ATGAGCACATCCAAATCCCGTCTTTCCCGTCGTGCGTTTACCGCCAGCGGACTCGCGGCCATTGGGGCCACCGCAGCATG
CAGCAACGGGATCGGCAACACCAATGACGTGAAAATCGACGCCCGCGTCAATGCCACCCTCAATCAGATGTATGACCGCT
ATCCCGGCACCCGCGATCTGGCACAGAAATCTGCCGGTATGCTGGTGATGCCCCTCGTCACCGAGGCGGGCTTTATCTTT
GGTGGCGCCTATGGGCGCGGCGCGCTGCGGATCAATGGCGCCACGGTTGACTATTATGCCGCCCTCAAGGGCAACGCCGG
TCTGCAGCTGGGCGCGCAGCAATATTCCCATGTCTTGTTCTTTATGACCGACGCCGCGCTGGCGCGGTTCCGCCGCTCGT
CGGGTTGGACGGCCGGTGCAGATCTTGAGTATGTGGTCATCGACGAAGGCGACGCACTGACGGCGGATACAAATACGCTG
ACGGCGCCTGTGGTTGCTGCAGTCTTTGGTCAGGCCGGGATTCGGATCGGAGCCACCATCGAGGGCTCCAAATACACACG
TATCATTCCCTGA

Upstream 100 bases:

>100_bases
GCTCAATCGGGCAGGCTTCAAAGTGACAGCTTTAGGGATTATGCATATAGTTGTGTCAAACAAAGCGCCAAAGCGCAGAT
TCACGAGCAGGTAACAGAAC

Downstream 100 bases:

>100_bases
TTTTGTTTTATATCAAGGTGATGAAGACCTCCCCTCATTCGAGGGGAGGCTTTTTTTCAGCCCAAGGCCCGCAGCCGTTT
GATCAGGGATGAGGTGTCCC

Product: twin-arginine translocation pathway signal sequence domain-containing protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSTSKSRLSRRAFTASGLAAIGATAACSNGIGNTNDVKIDARVNATLNQMYDRYPGTRDLAQKSAGMLVMPLVTEAGFIF
GGAYGRGALRINGATVDYYAALKGNAGLQLGAQQYSHVLFFMTDAALARFRRSSGWTAGADLEYVVIDEGDALTADTNTL
TAPVVAAVFGQAGIRIGATIEGSKYTRIIP

Sequences:

>Translated_190_residues
MSTSKSRLSRRAFTASGLAAIGATAACSNGIGNTNDVKIDARVNATLNQMYDRYPGTRDLAQKSAGMLVMPLVTEAGFIF
GGAYGRGALRINGATVDYYAALKGNAGLQLGAQQYSHVLFFMTDAALARFRRSSGWTAGADLEYVVIDEGDALTADTNTL
TAPVVAAVFGQAGIRIGATIEGSKYTRIIP
>Mature_189_residues
STSKSRLSRRAFTASGLAAIGATAACSNGIGNTNDVKIDARVNATLNQMYDRYPGTRDLAQKSAGMLVMPLVTEAGFIFG
GAYGRGALRINGATVDYYAALKGNAGLQLGAQQYSHVLFFMTDAALARFRRSSGWTAGADLEYVVIDEGDALTADTNTLT
APVVAAVFGQAGIRIGATIEGSKYTRIIP

Specific function: Unknown

COG id: COG2930

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19912; Mature: 19781

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSKSRLSRRAFTASGLAAIGATAACSNGIGNTNDVKIDARVNATLNQMYDRYPGTRDL
CCCCHHHHHHHHHHHCCHHHHCCHHHHCCCCCCCCCEEEEEEECHHHHHHHHHCCCHHHH
AQKSAGMLVMPLVTEAGFIFGGAYGRGALRINGATVDYYAALKGNAGLQLGAQQYSHVLF
HHHCCCEEEEEEHHHCCEEEECCCCCCEEEECCCEEEEEEEECCCCCEEECHHHHCEEEE
FMTDAALARFRRSSGWTAGADLEYVVIDEGDALTADTNTLTAPVVAAVFGQAGIRIGATI
EEHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHCCCCEEEEEEE
EGSKYTRIIP
CCCEEEEECC
>Mature Secondary Structure 
STSKSRLSRRAFTASGLAAIGATAACSNGIGNTNDVKIDARVNATLNQMYDRYPGTRDL
CCCHHHHHHHHHHHCCHHHHCCHHHHCCCCCCCCCEEEEEEECHHHHHHHHHCCCHHHH
AQKSAGMLVMPLVTEAGFIFGGAYGRGALRINGATVDYYAALKGNAGLQLGAQQYSHVLF
HHHCCCEEEEEEHHHCCEEEECCCCCCEEEECCCEEEEEEEECCCCCEEECHHHHCEEEE
FMTDAALARFRRSSGWTAGADLEYVVIDEGDALTADTNTLTAPVVAAVFGQAGIRIGATI
EEHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHCCCCEEEEEEE
EGSKYTRIIP
CCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA