Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081149

Identifier: 99081149

GI number: 99081149

Start: 1399240

End: 1399593

Strand: Direct

Name: 99081149

Synonym: TM1040_1308

Alternate gene names: NA

Gene position: 1399240-1399593 (Clockwise)

Preceding gene: 99081148

Following gene: 99081159

Centisome position: 43.71

GC content: 46.33

Gene sequence:

>354_bases
ATGAAGCGTGACGACGACTACATTAGAAGAATGTTGTTAGCTTTAGAGCTCGCTGACGACCCCTACCTTGCAGCCAGTCA
AGAGACCAACAGCATGTCTGCAAGCGAGGTGAAGAAAAACTATCATATCGCTCTTTTGTGTGATGCTGGTTTCATGAAAC
GTCACTCTGAAACACGTTTTCGAATGACAAACCAAGGGCACGATTATGTTTTATCCATCGAAGACGATGGCGTTTGGGAT
CAAACCAAGAAGAGTGCTGCCCAGGTTGGGGGTGTTGCTCTTGGCCTGATGAAAGATATAGCGCTTGGCTATGTAAAGCA
GAAGTTAGTTGGGCTAGGGATACCTGTTGAGTAG

Upstream 100 bases:

>100_bases
ACACACCTGTCGAACTCTTGGAACTTCTAAGTCAGCCATTTCGCGAGTTAGATTAGTCTCCTTTATCCCCGCCCCGGTTC
TGCTGATGTGAGAATAAAAA

Downstream 100 bases:

>100_bases
GGACTAAACGGCCCCCAAAGTCTGGGATACAAATCTGGTTTCAGTTAGAGAAATCATAAAAGAGTACAGGCACTACCGCC
TTCAACTGCAGTTTACTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKRDDDYIRRMLLALELADDPYLAASQETNSMSASEVKKNYHIALLCDAGFMKRHSETRFRMTNQGHDYVLSIEDDGVWD
QTKKSAAQVGGVALGLMKDIALGYVKQKLVGLGIPVE

Sequences:

>Translated_117_residues
MKRDDDYIRRMLLALELADDPYLAASQETNSMSASEVKKNYHIALLCDAGFMKRHSETRFRMTNQGHDYVLSIEDDGVWD
QTKKSAAQVGGVALGLMKDIALGYVKQKLVGLGIPVE
>Mature_117_residues
MKRDDDYIRRMLLALELADDPYLAASQETNSMSASEVKKNYHIALLCDAGFMKRHSETRFRMTNQGHDYVLSIEDDGVWD
QTKKSAAQVGGVALGLMKDIALGYVKQKLVGLGIPVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13064; Mature: 13064

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDDDYIRRMLLALELADDPYLAASQETNSMSASEVKKNYHIALLCDAGFMKRHSETRF
CCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHCCCCEEEEECCCHHHCCCCCEE
RMTNQGHDYVLSIEDDGVWDQTKKSAAQVGGVALGLMKDIALGYVKQKLVGLGIPVE
EECCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRDDDYIRRMLLALELADDPYLAASQETNSMSASEVKKNYHIALLCDAGFMKRHSETRF
CCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHCCCCEEEEECCCHHHCCCCCEE
RMTNQGHDYVLSIEDDGVWDQTKKSAAQVGGVALGLMKDIALGYVKQKLVGLGIPVE
EECCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA