Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081159

Identifier: 99081159

GI number: 99081159

Start: 1404882

End: 1405148

Strand: Direct

Name: 99081159

Synonym: TM1040_1318

Alternate gene names: NA

Gene position: 1404882-1405148 (Clockwise)

Preceding gene: 99081149

Following gene: 99081161

Centisome position: 43.89

GC content: 54.31

Gene sequence:

>267_bases
TTGAAAATCCTTGATAAAGCGCCCATCTGGAAGCGGCTCAAAGAGCTGCCCGGACGGATTGAAGCGCTTGAAGCGCGAGT
TGCGGAGTTGGAGGGTCAACCGGCACAAGCGTCGCACCTGCATACCTGCGCACAATGCGGGAAGCCTGCGAGTGTCACAA
AAATTTCGGATCACCCGGAATTTGGCTTTGCTGGCGTGAAAATCCGCACGATCACATGTGAGGATGGTCACGCGCTCAAC
TATGATTGGGACCCAAGTAAGGACTAG

Upstream 100 bases:

>100_bases
AGTGGAGAGCTTGCTTCCAAATTTGGCGACAATCGACTGCTCCACCGAGTTGCCATCATCAACAGAAGGTATCCCGCCCT
TGGTTTCGGTATCAGACATT

Downstream 100 bases:

>100_bases
TGGGTGCTGATTTCTCTTGCTTTTGTGAGCCATATTCACGCCGCTACCTCCAACGCCTGACCGAAAAACTCAGGCGCGCC
GGGGTCGGTCAGCATGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKILDKAPIWKRLKELPGRIEALEARVAELEGQPAQASHLHTCAQCGKPASVTKISDHPEFGFAGVKIRTITCEDGHALN
YDWDPSKD

Sequences:

>Translated_88_residues
MKILDKAPIWKRLKELPGRIEALEARVAELEGQPAQASHLHTCAQCGKPASVTKISDHPEFGFAGVKIRTITCEDGHALN
YDWDPSKD
>Mature_88_residues
MKILDKAPIWKRLKELPGRIEALEARVAELEGQPAQASHLHTCAQCGKPASVTKISDHPEFGFAGVKIRTITCEDGHALN
YDWDPSKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9737; Mature: 9737

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILDKAPIWKRLKELPGRIEALEARVAELEGQPAQASHLHTCAQCGKPASVTKISDHPE
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCCCC
FGFAGVKIRTITCEDGHALNYDWDPSKD
CCCCCEEEEEEEECCCCEECCCCCCCCC
>Mature Secondary Structure
MKILDKAPIWKRLKELPGRIEALEARVAELEGQPAQASHLHTCAQCGKPASVTKISDHPE
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCCCC
FGFAGVKIRTITCEDGHALNYDWDPSKD
CCCCCEEEEEEEECCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA