Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081132

Identifier: 99081132

GI number: 99081132

Start: 1386446

End: 1387345

Strand: Reverse

Name: 99081132

Synonym: TM1040_1291

Alternate gene names: NA

Gene position: 1387345-1386446 (Counterclockwise)

Preceding gene: 99081133

Following gene: 99081131

Centisome position: 43.34

GC content: 58.0

Gene sequence:

>900_bases
ATGGCTGGCGGCTTTGCATCAATCAATCTGTCTCAGTTGCCTGCGCCCGATGTGTTGCAGGCTATCGACTACGAAGTCGC
GCTCGCAGAAATGCTATCTGAGCTCAGGCAGAGAGATCCGGCTTTTGACGCTCTGGTCGAAAGTGACCCTGCCTACAAAA
TCCTCGAGATCGCGGCGTTTTATCGAACCTTGACTATTCAGCAGGGGAACGACGCAGCGCGAGCAGTGATGCCTGCCTAT
GCGACGGGTTCTGATCTTGACCATATTGCCGCCCGCTATGCTGTTGAACGATTGGTGATCGATCCCGGTGATCCTGAGGC
TCTCCCGCCAGTTCCCCCTGTCCTTGAGACCGACGACGCATTGCGCCGCCGAATGTTCCTCGCATTTGAAGGGCTGAGCA
CTGCGGGGCCGATGGGTGCCTATGTGTTCCATGCACTTGGCGCGGATCCGGACGTCGGGGATGCCAGCGTGCAAAGCCCC
GCGCCGGGCGAGGTGCTGGTCACGGTTCTTTCCCGGTCGGGCGATGGTGCTGCGCCTGCAACTCTGCTGACTGCTGTTGA
TGCTGCCTTGAACAAGGATGATGTGCGCCCGCTTACGGATCTCGTGACTGTCCAAGGGGCCGCAATCATCGGATATACCA
TCGAGGCGGTTCTTACTGTCTTACCCGGACCCGATAGTGCGGTTGTGCGAGACGCGGCTCAACGCGCAGCACTAGAGTAT
GCAAGCCAGCAGCACCGTATCGGGGCAGATATTACCCTTTCGGGGCTTTATGCTGCACTTCATCAGCCAGGAGTGCAGAA
CGTCGCGCTGATCAGTCCTGCAGCAGATATTCTGGTAGATGCAAGCGAGGCGGCATTCTGCTCTGCTGTTTCAGTTAGCA
TTGGGGGCACCAATGCCTGA

Upstream 100 bases:

>100_bases
CGCTCGAGGGTTCCGAACCTGGCGCAATCGTAATCGCTTTGGCGGGCCAGTATCTTCCAACAGGTGAGCCTGTGTTTCTC
GAAGGAATAGGGCTCAACTG

Downstream 100 bases:

>100_bases
AAGCCTTCTGCCGCATAACGCAACGACGCAGGAACGCGCTTTGGAAGCAGTTAGCGGGCCGCCTCTCTTCACGACAGCGC
CGCTCCGCGAAATCTGGGAT

Product: baseplate J-like protein

Products: NA

Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein; Bacteriophage Tail Fiber Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Phage Protein Gp; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate Protein; Phage Baseplate J-Like Protein; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly-Like Protein; Phage Baseplate Assembly; Prophage; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly Protein; Bacteriophage Baseplate Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Tail Protein; Phage Baseplate-Like Protein

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MAGGFASINLSQLPAPDVLQAIDYEVALAEMLSELRQRDPAFDALVESDPAYKILEIAAFYRTLTIQQGNDAARAVMPAY
ATGSDLDHIAARYAVERLVIDPGDPEALPPVPPVLETDDALRRRMFLAFEGLSTAGPMGAYVFHALGADPDVGDASVQSP
APGEVLVTVLSRSGDGAAPATLLTAVDAALNKDDVRPLTDLVTVQGAAIIGYTIEAVLTVLPGPDSAVVRDAAQRAALEY
ASQQHRIGADITLSGLYAALHQPGVQNVALISPAADILVDASEAAFCSAVSVSIGGTNA

Sequences:

>Translated_299_residues
MAGGFASINLSQLPAPDVLQAIDYEVALAEMLSELRQRDPAFDALVESDPAYKILEIAAFYRTLTIQQGNDAARAVMPAY
ATGSDLDHIAARYAVERLVIDPGDPEALPPVPPVLETDDALRRRMFLAFEGLSTAGPMGAYVFHALGADPDVGDASVQSP
APGEVLVTVLSRSGDGAAPATLLTAVDAALNKDDVRPLTDLVTVQGAAIIGYTIEAVLTVLPGPDSAVVRDAAQRAALEY
ASQQHRIGADITLSGLYAALHQPGVQNVALISPAADILVDASEAAFCSAVSVSIGGTNA
>Mature_298_residues
AGGFASINLSQLPAPDVLQAIDYEVALAEMLSELRQRDPAFDALVESDPAYKILEIAAFYRTLTIQQGNDAARAVMPAYA
TGSDLDHIAARYAVERLVIDPGDPEALPPVPPVLETDDALRRRMFLAFEGLSTAGPMGAYVFHALGADPDVGDASVQSPA
PGEVLVTVLSRSGDGAAPATLLTAVDAALNKDDVRPLTDLVTVQGAAIIGYTIEAVLTVLPGPDSAVVRDAAQRAALEYA
SQQHRIGADITLSGLYAALHQPGVQNVALISPAADILVDASEAAFCSAVSVSIGGTNA

Specific function: Unknown

COG id: COG3948

COG function: function code R; Phage-related baseplate assembly protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30985; Mature: 30854

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGFASINLSQLPAPDVLQAIDYEVALAEMLSELRQRDPAFDALVESDPAYKILEIAAF
CCCCCEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH
YRTLTIQQGNDAARAVMPAYATGSDLDHIAARYAVERLVIDPGDPEALPPVPPVLETDDA
HHHEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHH
LRRRMFLAFEGLSTAGPMGAYVFHALGADPDVGDASVQSPAPGEVLVTVLSRSGDGAAPA
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCCHH
TLLTAVDAALNKDDVRPLTDLVTVQGAAIIGYTIEAVLTVLPGPDSAVVRDAAQRAALEY
HHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ASQQHRIGADITLSGLYAALHQPGVQNVALISPAADILVDASEAAFCSAVSVSIGGTNA
HHHHHCCCCCEEHHHHHHHHHCCCCCCEEEECCHHHHEEECCHHHHHEEEEEECCCCCC
>Mature Secondary Structure 
AGGFASINLSQLPAPDVLQAIDYEVALAEMLSELRQRDPAFDALVESDPAYKILEIAAF
CCCCEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH
YRTLTIQQGNDAARAVMPAYATGSDLDHIAARYAVERLVIDPGDPEALPPVPPVLETDDA
HHHEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHH
LRRRMFLAFEGLSTAGPMGAYVFHALGADPDVGDASVQSPAPGEVLVTVLSRSGDGAAPA
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCCHH
TLLTAVDAALNKDDVRPLTDLVTVQGAAIIGYTIEAVLTVLPGPDSAVVRDAAQRAALEY
HHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ASQQHRIGADITLSGLYAALHQPGVQNVALISPAADILVDASEAAFCSAVSVSIGGTNA
HHHHHCCCCCEEHHHHHHHHHCCCCCCEEEECCHHHHEEECCHHHHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA