| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081131
Identifier: 99081131
GI number: 99081131
Start: 1385920
End: 1386465
Strand: Reverse
Name: 99081131
Synonym: TM1040_1290
Alternate gene names: NA
Gene position: 1386465-1385920 (Counterclockwise)
Preceding gene: 99081132
Following gene: 99081130
Centisome position: 43.31
GC content: 57.14
Gene sequence:
>546_bases TTGGGGGCACCAATGCCTGAAAGCCTTCTGCCGCATAACGCAACGACGCAGGAACGCGCTTTGGAAGCAGTTAGCGGGCC GCCTCTCTTCACGACAGCGCCGCTCCGCGAAATCTGGGATCCTGATCGTTGCCCGGTTGAGCTTTTGCCATGGTTGGCCT TTTCTCTCTCTGTAGATGAGTGGGATCCTTCTTGGAGCGAGCCTGCAAAGCGTGAGGTTATTCGCCGCTCTTTTGTGGTC CATCAACGAAAAGGGACACGGGGTGCAGTCGCTGAGGCGCTCGAGGCGATTGGGTTTGTGCCTGAAATCGTGGAGTGGTT TCAGGCAGATCCGCGAAGGGCACCCCATACTTTTGCACTCAAGCTTGATGCTGTGCGCGACTTTAACAGCCCTGAGAGTA TCCAGCGCGCACTGCGCGCAGTTGATGAATCAAAGCCTATTCGGGCGCACCTAACATCAGTTCAAATCTCGACCGCAACA GTCTCTGAACCCGTCGCCGCAGCGGCGGTAGTGGTGGGGCAAGAGATCACCGTGAGCGCAGCATGA
Upstream 100 bases:
>100_bases CATCAGCCAGGAGTGCAGAACGTCGCGCTGATCAGTCCTGCAGCAGATATTCTGGTAGATGCAAGCGAGGCGGCATTCTG CTCTGCTGTTTCAGTTAGCA
Downstream 100 bases:
>100_bases AGGGGGTAAGATGACACAGATAGTTGCAATTCACACCACCGCAGGACTGGCGCTTTTGGCGCAAGCTCAGGGAGAGGGGG CGCTGATCACCCTCGGCGAT
Product: Phage tail protein I
Products: NA
Alternate protein names: Tail Protein I; Phage Tail Protein; Phage-Related Tail Protein; Bacteriophage P2-Related Tail Formation Protein; Bacteriophage Protein; Pyocin R2_PP Tail Formation Protein GpI; Tail Protein I Prophage; Phage P2 Baseplate Assembly GpI-Like Protein; Prophage Tail Protein; Phage-Related Tail Protein I; Phage Tail-Like Protein; Bacteriophage Tail Protein I; Tail Formation-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPI; Bacteriophage P2-Related Tail Formation Protein GpI; Bacteriophage Tail Formation Protein I; Pyocin R2_PP Tail Formation Protein
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MGAPMPESLLPHNATTQERALEAVSGPPLFTTAPLREIWDPDRCPVELLPWLAFSLSVDEWDPSWSEPAKREVIRRSFVV HQRKGTRGAVAEALEAIGFVPEIVEWFQADPRRAPHTFALKLDAVRDFNSPESIQRALRAVDESKPIRAHLTSVQISTAT VSEPVAAAAVVVGQEITVSAA
Sequences:
>Translated_181_residues MGAPMPESLLPHNATTQERALEAVSGPPLFTTAPLREIWDPDRCPVELLPWLAFSLSVDEWDPSWSEPAKREVIRRSFVV HQRKGTRGAVAEALEAIGFVPEIVEWFQADPRRAPHTFALKLDAVRDFNSPESIQRALRAVDESKPIRAHLTSVQISTAT VSEPVAAAAVVVGQEITVSAA >Mature_180_residues GAPMPESLLPHNATTQERALEAVSGPPLFTTAPLREIWDPDRCPVELLPWLAFSLSVDEWDPSWSEPAKREVIRRSFVVH QRKGTRGAVAEALEAIGFVPEIVEWFQADPRRAPHTFALKLDAVRDFNSPESIQRALRAVDESKPIRAHLTSVQISTATV SEPVAAAAVVVGQEITVSAA
Specific function: Unknown
COG id: COG4385
COG function: function code R; Bacteriophage P2-related tail formation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19851; Mature: 19719
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPMPESLLPHNATTQERALEAVSGPPLFTTAPLREIWDPDRCPVELLPWLAFSLSVDE CCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCC WDPSWSEPAKREVIRRSFVVHQRKGTRGAVAEALEAIGFVPEIVEWFQADPRRAPHTFAL CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEE KLDAVRDFNSPESIQRALRAVDESKPIRAHLTSVQISTATVSEPVAAAAVVVGQEITVSA EEHHHHCCCCHHHHHHHHHHHCCCCCCEEHHHEEEEEHHHHHHHHHHHHHHHCCCEEEEC A C >Mature Secondary Structure GAPMPESLLPHNATTQERALEAVSGPPLFTTAPLREIWDPDRCPVELLPWLAFSLSVDE CCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCC WDPSWSEPAKREVIRRSFVVHQRKGTRGAVAEALEAIGFVPEIVEWFQADPRRAPHTFAL CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEE KLDAVRDFNSPESIQRALRAVDESKPIRAHLTSVQISTATVSEPVAAAAVVVGQEITVSA EEHHHHCCCCHHHHHHHHHHHCCCCCCEEHHHEEEEEHHHHHHHHHHHHHHHCCCEEEEC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA