Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is pstS [H]

Identifier: 99081103

GI number: 99081103

Start: 1359739

End: 1360779

Strand: Reverse

Name: pstS [H]

Synonym: TM1040_1262

Alternate gene names: 99081103

Gene position: 1360779-1359739 (Counterclockwise)

Preceding gene: 99081104

Following gene: 99081102

Centisome position: 42.51

GC content: 58.6

Gene sequence:

>1041_bases
ATGTCCTTTGTGAAACTGACCGCATCCACTCTCGCCATCGCAGCCGTATCGGCCACCGCAGCTTCTGCGCGTGAGCAGGT
GCAGGTCGCAGGTTCTTCCACCGTTCTGCCCTATGCTTCGATCGTTGCCGAAGCCTTTGGCGAAAACTTCGACTTCCCGA
CACCGGTTGTCGAATCCGGTGGATCCTCCGCCGGCCTCAAGCGTTTCTGCGAAGGCGTTGGCGAAAACACCATCGACATT
GCAAACGCCTCCCGCGCGATCAAAGAAAAAGAGATCAAGGCCTGTGCCGAAGCCGGCGTGACCGACATCATCGAAGTCCG
CATCGGTTATGATGGCATCGTGTTTGCCTCCGACATCGACGGCAACGGTTTTGAATTCACCCCGACCGATTGGTTCCTCG
CGCTCTCCGACAAAGTTGTTGTTGACGGCGCGCTGGTCGACAACCCGAACAAGACCTGGGCCGATGTAAACGCCGCCTTC
CCGGCACAGCCCATCCAGGCCTTCATCCCCGGCACCAAGCACGGCACCCGCGAAGTCTTTGAAGACAAAGTGATCCTCGC
TGGCTGTGAAGAAACCGGCGCGTTCGATCTGCTGAAAGAAGCCAACGGTGGCGACAAGAAAGCAGCCGAAAAAGCCTGTA
TCGCTCTGCGCACCGACGGCGTGTCCGTGGACATCGACGGCGACTACACCGAGACCCTCGCACGTATCGACTCCAACAAG
GACGGTATCGGCGTGTTCGGTCTGGCCTTCTACGAGAACAACACCGACAAGCTGCAGGTTGCAACCATGTCCGGCGTTGT
TCCCTCCACCGAATCCATCGCAACCGGCGAATATCCGGTGTCCCGCCCGCTGTACTTCTACGTGAAGAAAGCGCACATCG
GCGTAATCCCCGGCCTCAAGGAATTCGCTGAGTTCTTCGTTGCAGATGAAGTTGCTGGCCCCGACGGCCCGCTGGCCGAA
TACGGCCTCGTAGCAGACCCCGAGCTTGCAAAGACTCAGGAAGCTGTTGCAGCAGAAGCAACCATGGGCGGCAACTCCTA
A

Upstream 100 bases:

>100_bases
TGTTACATAGCTGTCACAAAAGCCACACCTGAGCCTTCTAGGAGGGGCGCAAGATCATCTTGGGGGTGATCGTAAACTTC
TTAAACTCATGGAGACTTCA

Downstream 100 bases:

>100_bases
TAGCCCCGCGCATGTAAAGTTCAGGCCGGGGCGGATATGACGTCCCGGCCTTTCGTTTCAAAAGTATCGCTGTTTTCCTC
CCTTCTTGCACCGCCAAACG

Product: phosphate ABC transporter, periplasmic phosphate-binding protein

Products: NA

Alternate protein names: PBP [H]

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MSFVKLTASTLAIAAVSATAASAREQVQVAGSSTVLPYASIVAEAFGENFDFPTPVVESGGSSAGLKRFCEGVGENTIDI
ANASRAIKEKEIKACAEAGVTDIIEVRIGYDGIVFASDIDGNGFEFTPTDWFLALSDKVVVDGALVDNPNKTWADVNAAF
PAQPIQAFIPGTKHGTREVFEDKVILAGCEETGAFDLLKEANGGDKKAAEKACIALRTDGVSVDIDGDYTETLARIDSNK
DGIGVFGLAFYENNTDKLQVATMSGVVPSTESIATGEYPVSRPLYFYVKKAHIGVIPGLKEFAEFFVADEVAGPDGPLAE
YGLVADPELAKTQEAVAAEATMGGNS

Sequences:

>Translated_346_residues
MSFVKLTASTLAIAAVSATAASAREQVQVAGSSTVLPYASIVAEAFGENFDFPTPVVESGGSSAGLKRFCEGVGENTIDI
ANASRAIKEKEIKACAEAGVTDIIEVRIGYDGIVFASDIDGNGFEFTPTDWFLALSDKVVVDGALVDNPNKTWADVNAAF
PAQPIQAFIPGTKHGTREVFEDKVILAGCEETGAFDLLKEANGGDKKAAEKACIALRTDGVSVDIDGDYTETLARIDSNK
DGIGVFGLAFYENNTDKLQVATMSGVVPSTESIATGEYPVSRPLYFYVKKAHIGVIPGLKEFAEFFVADEVAGPDGPLAE
YGLVADPELAKTQEAVAAEATMGGNS
>Mature_345_residues
SFVKLTASTLAIAAVSATAASAREQVQVAGSSTVLPYASIVAEAFGENFDFPTPVVESGGSSAGLKRFCEGVGENTIDIA
NASRAIKEKEIKACAEAGVTDIIEVRIGYDGIVFASDIDGNGFEFTPTDWFLALSDKVVVDGALVDNPNKTWADVNAAFP
AQPIQAFIPGTKHGTREVFEDKVILAGCEETGAFDLLKEANGGDKKAAEKACIALRTDGVSVDIDGDYTETLARIDSNKD
GIGVFGLAFYENNTDKLQVATMSGVVPSTESIATGEYPVSRPLYFYVKKAHIGVIPGLKEFAEFFVADEVAGPDGPLAEY
GLVADPELAKTQEAVAAEATMGGNS

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36260; Mature: 36129

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVKLTASTLAIAAVSATAASAREQVQVAGSSTVLPYASIVAEAFGENFDFPTPVVESG
CCEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHCC
GSSAGLKRFCEGVGENTIDIANASRAIKEKEIKACAEAGVTDIIEVRIGYDGIVFASDID
CCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCC
GNGFEFTPTDWFLALSDKVVVDGALVDNPNKTWADVNAAFPAQPIQAFIPGTKHGTREVF
CCCCEECCCCEEEEECCEEEEEEEEECCCCCCEEECCCCCCCCCHHHHCCCCCCCCHHHH
EDKVILAGCEETGAFDLLKEANGGDKKAAEKACIALRTDGVSVDIDGDYTETLARIDSNK
CCCEEEEECCCCCHHHHHHHCCCCCHHHHHHEEEEEEECCEEEEECCCHHHHHHHHCCCC
DGIGVFGLAFYENNTDKLQVATMSGVVPSTESIATGEYPVSRPLYFYVKKAHIGVIPGLK
CCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCHH
EFAEFFVADEVAGPDGPLAEYGLVADPELAKTQEAVAAEATMGGNS
HHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SFVKLTASTLAIAAVSATAASAREQVQVAGSSTVLPYASIVAEAFGENFDFPTPVVESG
CEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHCC
GSSAGLKRFCEGVGENTIDIANASRAIKEKEIKACAEAGVTDIIEVRIGYDGIVFASDID
CCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCC
GNGFEFTPTDWFLALSDKVVVDGALVDNPNKTWADVNAAFPAQPIQAFIPGTKHGTREVF
CCCCEECCCCEEEEECCEEEEEEEEECCCCCCEEECCCCCCCCCHHHHCCCCCCCCHHHH
EDKVILAGCEETGAFDLLKEANGGDKKAAEKACIALRTDGVSVDIDGDYTETLARIDSNK
CCCEEEEECCCCCHHHHHHHCCCCCHHHHHHEEEEEEECCEEEEECCCHHHHHHHHCCCC
DGIGVFGLAFYENNTDKLQVATMSGVVPSTESIATGEYPVSRPLYFYVKKAHIGVIPGLK
CCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCHH
EFAEFFVADEVAGPDGPLAEYGLVADPELAKTQEAVAAEATMGGNS
HHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA