Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yqgH [H]

Identifier: 99081102

GI number: 99081102

Start: 1358151

End: 1359629

Strand: Reverse

Name: yqgH [H]

Synonym: TM1040_1261

Alternate gene names: 99081102

Gene position: 1359629-1358151 (Counterclockwise)

Preceding gene: 99081103

Following gene: 99081101

Centisome position: 42.48

GC content: 60.85

Gene sequence:

>1479_bases
ATGCCTACCCTATGGCTTATCCTCGGCTTGATCGCCCTCTCGGTCGCCGGGTTCTTCCTCGGCCGCAATCGGGCCTTGGT
TTCCGCGGATGGAAACCCCAAGGATCTACACTCGCTGCCCTCTTATTATGGGCATAACGTGGCACTGTCGGCTTTGGTGC
CGGCGCTTGTCCTTCTTGCCGTCTGGCTCTTGGCGCAGCCCATGATCATCGACAAACGGGTTTCCGGCATGATCCCCGAC
GCGGCGATCTCCGAAGGCTCGACCCTGAGCCTCGTCATGAGCGACGTGCGCCGCGTGGCCGAGGGGCTCGACATTGCCGT
GGCCCAGGGGGCCATGACGCAGGCACAGTCAGATGACCTCAGCAGCGGCACCACCGACGTACGCGCCGTTCTGGGCGATG
TTGGCGTCGCCTTGGGATCGGACGTGCGTCCCGAGGTGCTGAGCGCCGCGCAAACCTATCGCGCGCTTTCCAGCACCGGC
CATTTGTCCATGTGGGTCAGCGTTGTTCTGGTGGCTCTGGGCGGCTTTGGCTGGTCCTACGGGCGCACGCACAAGGATTT
TCGCGCCCGCAACGTGGTCGAGCAGGGCATCATGGCATTGCTGATCCTTGCGGCATCGCTCGCGATCCTCACCACCATCG
GTATTGTCCTTTCGATGCTGTTTGAGACACGCAACTTCTTTGCGCTGCATTCCTGGACCGATTTCTTCTTTGGCGACACC
TGGGCTCCGAACTTTCGCGGTGATTCCGATCTGTCGATCCTGCCGCTTCTGTGGGGCACACTCTATATCTCCTTTATTGC
GCTCATGGTTGCAGTGCCGATCGGTTTGTTTGCCGCGATCTACCTCAGCGAATATGCCAGCAAGACCACCCGTTCCTTTG
CCAAGCCTCTGCTTGAGATCCTCGCCGGGATCCCGACCATCGTTTATGGCCTCTTTGCGCTTTTGACCGTGGGACCGGCG
CTTGTGCGTTTCTTTGGCCAGGGCGAAAACGGCGTCCTGGGAGTGGAGTGGATGAGCGGCGCGACCTCGGTTCTGACCGC
AGGCGTCGTGATGGGGATCATGCTCATTCCTTTTGTCTCCTCGCTCTCTGATGACATCATCAACGCGGTGCCACAGGCGA
TGCGCGATGGCTCGCTTGGTCTTGGCGCCACAAAGTCCGAGACCGTGCGTCAGGTGGTCATGCCCGCAGCCTTGCCCGGC
ATCGTCGGCGCGATCCTGCTGGCAGCCTCCCGCGCGATCGGCGAGACCATGATCGTGGTGATGGGCGCAGGCGCGATTGC
GAAGTTCTCGCTCAACCCGCTTGATTCCATGACAACAATCACCACCCGGATCGTGAGCCAGCTGACTGGCGATACCGATT
TCGCCAGCCCCGAAACCCTGGTCGCTTTTGCCCTTGGCCTGACACTCTTCGTGCTGACCCTCGGGCTCAATGTCCTCGCA
CTCTACATCGTGCGCAGATACCGGGAGCAGTATGACTGA

Upstream 100 bases:

>100_bases
GCATGTAAAGTTCAGGCCGGGGCGGATATGACGTCCCGGCCTTTCGTTTCAAAAGTATCGCTGTTTTCCTCCCTTCTTGC
ACCGCCAAACGGAGCTCTTG

Downstream 100 bases:

>100_bases
TGACCGATCTTAGCCAAAATCCCTCCTCCGGAGACGCACCCATGTCGCGCAAACCTGGCACCTCACTGCTGGAACTGTCG
GATCGCACCAAACGCCGCAA

Product: phosphate ABC transporter permease

Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MPTLWLILGLIALSVAGFFLGRNRALVSADGNPKDLHSLPSYYGHNVALSALVPALVLLAVWLLAQPMIIDKRVSGMIPD
AAISEGSTLSLVMSDVRRVAEGLDIAVAQGAMTQAQSDDLSSGTTDVRAVLGDVGVALGSDVRPEVLSAAQTYRALSSTG
HLSMWVSVVLVALGGFGWSYGRTHKDFRARNVVEQGIMALLILAASLAILTTIGIVLSMLFETRNFFALHSWTDFFFGDT
WAPNFRGDSDLSILPLLWGTLYISFIALMVAVPIGLFAAIYLSEYASKTTRSFAKPLLEILAGIPTIVYGLFALLTVGPA
LVRFFGQGENGVLGVEWMSGATSVLTAGVVMGIMLIPFVSSLSDDIINAVPQAMRDGSLGLGATKSETVRQVVMPAALPG
IVGAILLAASRAIGETMIVVMGAGAIAKFSLNPLDSMTTITTRIVSQLTGDTDFASPETLVAFALGLTLFVLTLGLNVLA
LYIVRRYREQYD

Sequences:

>Translated_492_residues
MPTLWLILGLIALSVAGFFLGRNRALVSADGNPKDLHSLPSYYGHNVALSALVPALVLLAVWLLAQPMIIDKRVSGMIPD
AAISEGSTLSLVMSDVRRVAEGLDIAVAQGAMTQAQSDDLSSGTTDVRAVLGDVGVALGSDVRPEVLSAAQTYRALSSTG
HLSMWVSVVLVALGGFGWSYGRTHKDFRARNVVEQGIMALLILAASLAILTTIGIVLSMLFETRNFFALHSWTDFFFGDT
WAPNFRGDSDLSILPLLWGTLYISFIALMVAVPIGLFAAIYLSEYASKTTRSFAKPLLEILAGIPTIVYGLFALLTVGPA
LVRFFGQGENGVLGVEWMSGATSVLTAGVVMGIMLIPFVSSLSDDIINAVPQAMRDGSLGLGATKSETVRQVVMPAALPG
IVGAILLAASRAIGETMIVVMGAGAIAKFSLNPLDSMTTITTRIVSQLTGDTDFASPETLVAFALGLTLFVLTLGLNVLA
LYIVRRYREQYD
>Mature_491_residues
PTLWLILGLIALSVAGFFLGRNRALVSADGNPKDLHSLPSYYGHNVALSALVPALVLLAVWLLAQPMIIDKRVSGMIPDA
AISEGSTLSLVMSDVRRVAEGLDIAVAQGAMTQAQSDDLSSGTTDVRAVLGDVGVALGSDVRPEVLSAAQTYRALSSTGH
LSMWVSVVLVALGGFGWSYGRTHKDFRARNVVEQGIMALLILAASLAILTTIGIVLSMLFETRNFFALHSWTDFFFGDTW
APNFRGDSDLSILPLLWGTLYISFIALMVAVPIGLFAAIYLSEYASKTTRSFAKPLLEILAGIPTIVYGLFALLTVGPAL
VRFFGQGENGVLGVEWMSGATSVLTAGVVMGIMLIPFVSSLSDDIINAVPQAMRDGSLGLGATKSETVRQVVMPAALPGI
VGAILLAASRAIGETMIVVMGAGAIAKFSLNPLDSMTTITTRIVSQLTGDTDFASPETLVAFALGLTLFVLTLGLNVLAL
YIVRRYREQYD

Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0573

COG function: function code P; ABC-type phosphate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790164, Length=313, Percent_Identity=29.3929712460064, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1790163, Length=165, Percent_Identity=28.4848484848485, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR011864 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 52180; Mature: 52049

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLWLILGLIALSVAGFFLGRNRALVSADGNPKDLHSLPSYYGHNVALSALVPALVLLA
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VWLLAQPMIIDKRVSGMIPDAAISEGSTLSLVMSDVRRVAEGLDIAVAQGAMTQAQSDDL
HHHHHCCHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
SSGTTDVRAVLGDVGVALGSDVRPEVLSAAQTYRALSSTGHLSMWVSVVLVALGGFGWSY
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
GRTHKDFRARNVVEQGIMALLILAASLAILTTIGIVLSMLFETRNFFALHSWTDFFFGDT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHCCCC
WAPNFRGDSDLSILPLLWGTLYISFIALMVAVPIGLFAAIYLSEYASKTTRSFAKPLLEI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGIPTIVYGLFALLTVGPALVRFFGQGENGVLGVEWMSGATSVLTAGVVMGIMLIPFVS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHH
SLSDDIINAVPQAMRDGSLGLGATKSETVRQVVMPAALPGIVGAILLAASRAIGETMIVV
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
MGAGAIAKFSLNPLDSMTTITTRIVSQLTGDTDFASPETLVAFALGLTLFVLTLGLNVLA
ECCCHHEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LYIVRRYREQYD
HHHHHHHHHHCC
>Mature Secondary Structure 
PTLWLILGLIALSVAGFFLGRNRALVSADGNPKDLHSLPSYYGHNVALSALVPALVLLA
CHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH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HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; phosphate [Periplasm]; H2O [C]

Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8760913; 8969508; 9384377 [H]