| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yqgI [H]
Identifier: 99081101
GI number: 99081101
Start: 1356784
End: 1358151
Strand: Reverse
Name: yqgI [H]
Synonym: TM1040_1260
Alternate gene names: 99081101
Gene position: 1358151-1356784 (Counterclockwise)
Preceding gene: 99081102
Following gene: 99081100
Centisome position: 42.43
GC content: 59.06
Gene sequence:
>1368_bases ATGACCGATCTTAGCCAAAATCCCTCCTCCGGAGACGCACCCATGTCGCGCAAACCTGGCACCTCACTGCTGGAACTGTC GGATCGCACCAAACGCCGCAACGCCGCCGAGACCCGGTTCAAGGCCTATGGCATTGCCGCTATCGCGGTCGGCCTGTTGA TGCTTGTTGTTCTGGTGACAACCATCGTCAGCAAGGGAACAGGCGCGTTTCAGCAGACATTCATCACGCTCCCGGTCGAG CTCCTGGAAAGCAAGCTCGACAAGAACGGCAACCGCGATATTGAAGACATCAAGAAGGTCACGACGTTTGGATATGCGCC GATCATTCGCAACGCCGTCGAGGCGAAAGTGACCGATCTTGGCGTTGAAACCTCGCTCAAGGCCAAGGACATGGCGGGGC TTCTGTCCAAGAACGCCGCCGCAACCCTGCGCGAATTCGTGATCGCCAATCCGGATCAGATCGGCACCACTGTGGAGTTC CGCTTCCTCGCACAGAGCCGTGTCGACGGGTATCTGAAGGGGCGCGTGAGCCGAGACAGCATCGAGAATGACAAGAATAT CTCGGTTGAACAGCTCGATCTCGTTGACGCGCTGGTGGCGGCCAATGTGATCGAAAAAACCTTCAACCTCGACTTCATTC TCGGCTCGGATGCATCGGACGCACGCCCCGAAGCCGCAGGCATGGGGGTCTCCATGTTGGGGTCGCTCTTCATGATGTTC GTGGTGCTGGCGCTTGCACTGCCGATCGGAGTTGCGGCTTCGATCTATCTTGAGGAGTTTGCGCCGCAGAACTGGATTAC CGACATCATCGAGGTGAACATCTCCAACCTCGCGGCGGTACCCTCGATTGTCTTTGGTATTCTGGGGCTTGCGGTCTTTA TCAACTACATGCACCTGCCGACCTCGGCGCCGCTTGTGGGCGGTCTGGTGCTCACGCTGATGACACTGCCGACCATCATC ATCTCGACCCGCGCGTCGCTTAAGGCCGTACCGCCTTCGATCCGCGATGCCGCATTGGGCGTGGGCGCCTCCAAGATGCA GGCCGTGTTTCACCATGTTCTGCCGCTCGCCGCACCGGGGATCCTCACCGGGACCATCATCGGTCTGGCACAAGCACTGG GTGAAACCGCGCCGCTTCTGCTGATCGGCATGGTGGGCTTTATCGCCTCCAACGCCCCCGACAGCATTGCCTCCGGTCTC TTGTCGCCGAACTCCGCCATGCCCGCACAGATCTATGAGTGGGCCAAACGCGCCGATCCAGCGTTTTACGAACGCGCCTG GGGCGGTATCATCATCCTGCTGGTCTTCTTGATCACCATGAACACATTGGCCGTTATCTTGCGCCGCCGATTTGAACGCC GCTGGTAA
Upstream 100 bases:
>100_bases TGGTCGCTTTTGCCCTTGGCCTGACACTCTTCGTGCTGACCCTCGGGCTCAATGTCCTCGCACTCTACATCGTGCGCAGA TACCGGGAGCAGTATGACTG
Downstream 100 bases:
>100_bases AGGGGCCCTACAATGAACGATATGACAGCAATGGACAGCACCGTGGAAACACAACGCACCAAGATCGCAGCCAAGGGCGT CAACGTCTATTACGGCGACA
Product: phosphate ABC transporter permease
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MTDLSQNPSSGDAPMSRKPGTSLLELSDRTKRRNAAETRFKAYGIAAIAVGLLMLVVLVTTIVSKGTGAFQQTFITLPVE LLESKLDKNGNRDIEDIKKVTTFGYAPIIRNAVEAKVTDLGVETSLKAKDMAGLLSKNAAATLREFVIANPDQIGTTVEF RFLAQSRVDGYLKGRVSRDSIENDKNISVEQLDLVDALVAANVIEKTFNLDFILGSDASDARPEAAGMGVSMLGSLFMMF VVLALALPIGVAASIYLEEFAPQNWITDIIEVNISNLAAVPSIVFGILGLAVFINYMHLPTSAPLVGGLVLTLMTLPTII ISTRASLKAVPPSIRDAALGVGASKMQAVFHHVLPLAAPGILTGTIIGLAQALGETAPLLLIGMVGFIASNAPDSIASGL LSPNSAMPAQIYEWAKRADPAFYERAWGGIIILLVFLITMNTLAVILRRRFERRW
Sequences:
>Translated_455_residues MTDLSQNPSSGDAPMSRKPGTSLLELSDRTKRRNAAETRFKAYGIAAIAVGLLMLVVLVTTIVSKGTGAFQQTFITLPVE LLESKLDKNGNRDIEDIKKVTTFGYAPIIRNAVEAKVTDLGVETSLKAKDMAGLLSKNAAATLREFVIANPDQIGTTVEF RFLAQSRVDGYLKGRVSRDSIENDKNISVEQLDLVDALVAANVIEKTFNLDFILGSDASDARPEAAGMGVSMLGSLFMMF VVLALALPIGVAASIYLEEFAPQNWITDIIEVNISNLAAVPSIVFGILGLAVFINYMHLPTSAPLVGGLVLTLMTLPTII ISTRASLKAVPPSIRDAALGVGASKMQAVFHHVLPLAAPGILTGTIIGLAQALGETAPLLLIGMVGFIASNAPDSIASGL LSPNSAMPAQIYEWAKRADPAFYERAWGGIIILLVFLITMNTLAVILRRRFERRW >Mature_454_residues TDLSQNPSSGDAPMSRKPGTSLLELSDRTKRRNAAETRFKAYGIAAIAVGLLMLVVLVTTIVSKGTGAFQQTFITLPVEL LESKLDKNGNRDIEDIKKVTTFGYAPIIRNAVEAKVTDLGVETSLKAKDMAGLLSKNAAATLREFVIANPDQIGTTVEFR FLAQSRVDGYLKGRVSRDSIENDKNISVEQLDLVDALVAANVIEKTFNLDFILGSDASDARPEAAGMGVSMLGSLFMMFV VLALALPIGVAASIYLEEFAPQNWITDIIEVNISNLAAVPSIVFGILGLAVFINYMHLPTSAPLVGGLVLTLMTLPTIII STRASLKAVPPSIRDAALGVGASKMQAVFHHVLPLAAPGILTGTIIGLAQALGETAPLLLIGMVGFIASNAPDSIASGLL SPNSAMPAQIYEWAKRADPAFYERAWGGIIILLVFLITMNTLAVILRRRFERRW
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=222, Percent_Identity=28.8288288288288, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1790164, Length=195, Percent_Identity=29.7435897435897, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 48707; Mature: 48575
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLSQNPSSGDAPMSRKPGTSLLELSDRTKRRNAAETRFKAYGIAAIAVGLLMLVVLVT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIVSKGTGAFQQTFITLPVELLESKLDKNGNRDIEDIKKVTTFGYAPIIRNAVEAKVTDL HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC GVETSLKAKDMAGLLSKNAAATLREFVIANPDQIGTTVEFRFLAQSRVDGYLKGRVSRDS CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCHHHHCCCCHHC IENDKNISVEQLDLVDALVAANVIEKTFNLDFILGSDASDARPEAAGMGVSMLGSLFMMF CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHCCCHHHHHHHHHHH VVLALALPIGVAASIYLEEFAPQNWITDIIEVNISNLAAVPSIVFGILGLAVFINYMHLP HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TSAPLVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGVGASKMQAVFHHVLPLAAPG CCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCH ILTGTIIGLAQALGETAPLLLIGMVGFIASNAPDSIASGLLSPNSAMPAQIYEWAKRADP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCH AFYERAWGGIIILLVFLITMNTLAVILRRRFERRW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDLSQNPSSGDAPMSRKPGTSLLELSDRTKRRNAAETRFKAYGIAAIAVGLLMLVVLVT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIVSKGTGAFQQTFITLPVELLESKLDKNGNRDIEDIKKVTTFGYAPIIRNAVEAKVTDL HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC GVETSLKAKDMAGLLSKNAAATLREFVIANPDQIGTTVEFRFLAQSRVDGYLKGRVSRDS CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCHHHHCCCCHHC IENDKNISVEQLDLVDALVAANVIEKTFNLDFILGSDASDARPEAAGMGVSMLGSLFMMF CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHCCCHHHHHHHHHHH VVLALALPIGVAASIYLEEFAPQNWITDIIEVNISNLAAVPSIVFGILGLAVFINYMHLP HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TSAPLVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGVGASKMQAVFHHVLPLAAPG CCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCH ILTGTIIGLAQALGETAPLLLIGMVGFIASNAPDSIASGLLSPNSAMPAQIYEWAKRADP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCH AFYERAWGGIIILLVFLITMNTLAVILRRRFERRW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]