| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081089
Identifier: 99081089
GI number: 99081089
Start: 1342183
End: 1342761
Strand: Direct
Name: 99081089
Synonym: TM1040_1248
Alternate gene names: NA
Gene position: 1342183-1342761 (Clockwise)
Preceding gene: 99081088
Following gene: 99081090
Centisome position: 41.93
GC content: 55.27
Gene sequence:
>579_bases ATGAACTTCAAAGACCTATTGGTCGAAACTATCGTTAATCCTGCCTCGGCTGCGCGCCGGATCATGGCGCTCAATCTTAC TGACGAAGTGGTCTGGACGGGGTTTGCGCTGAATGTTGTGCTCAGCGTTCTGCTCTATGCAGGGCAGGGCGTGTTGCTGG GCGATCCCTCCAATGCGCTCTTTCCGGGACTGAGCCCCGCACTCTTTGGCGCGTTCCTTGTCGTGCTGCAGCTCAGCTAC ACTGCCGCGTCGATGGTTGCGGCGAGGTGGATGGGCGGAGACGCAGAATTTGGCACCATTCTGGGACTGCTCGTCTGGCT GCGCATCGTGAATATCGTTGTGCAGGTTATTGCGATTGCGATGGTTTTTGTCATTGCACCCTTGGCCGTTCTGTTTAACT TCGCAGCTGCGCTCTATGGGCTCTATGTCTTGGCGCACTTCACTAAAGAAGGGTTTGGCCTCTCTTCGCTTGGCAAATCT GCAGGCGTGATCCTGTTGGCCGGGCTTGGTGCGATGATCGCTGTTTTGATCCTGATGGGCCTTTTTGCGCCCACAATTCT GGAGACGTCCAATGTATGA
Upstream 100 bases:
>100_bases GGCCGAGCCCTGCACTGAGTTCAGTTGGACTTTTGTGGCTTGCTGTTTTCCTTTGGTTCTGGATCTCTGGTCTGATCGAG GCCTACTGGGGTAAAAACTG
Downstream 100 bases:
>100_bases TGTCGAAAAAATCCGCTCTGACTTTCCGATCCTGTCACGCGAAGTGAACGGAAAGCCGCTGGTCTATCTCGATAACGGGG CCTCTGCGCAGAAACCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNFKDLLVETIVNPASAARRIMALNLTDEVVWTGFALNVVLSVLLYAGQGVLLGDPSNALFPGLSPALFGAFLVVLQLSY TAASMVAARWMGGDAEFGTILGLLVWLRIVNIVVQVIAIAMVFVIAPLAVLFNFAAALYGLYVLAHFTKEGFGLSSLGKS AGVILLAGLGAMIAVLILMGLFAPTILETSNV
Sequences:
>Translated_192_residues MNFKDLLVETIVNPASAARRIMALNLTDEVVWTGFALNVVLSVLLYAGQGVLLGDPSNALFPGLSPALFGAFLVVLQLSY TAASMVAARWMGGDAEFGTILGLLVWLRIVNIVVQVIAIAMVFVIAPLAVLFNFAAALYGLYVLAHFTKEGFGLSSLGKS AGVILLAGLGAMIAVLILMGLFAPTILETSNV >Mature_192_residues MNFKDLLVETIVNPASAARRIMALNLTDEVVWTGFALNVVLSVLLYAGQGVLLGDPSNALFPGLSPALFGAFLVVLQLSY TAASMVAARWMGGDAEFGTILGLLVWLRIVNIVVQVIAIAMVFVIAPLAVLFNFAAALYGLYVLAHFTKEGFGLSSLGKS AGVILLAGLGAMIAVLILMGLFAPTILETSNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20157; Mature: 20157
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKDLLVETIVNPASAARRIMALNLTDEVVWTGFALNVVLSVLLYAGQGVLLGDPSNAL CCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC FPGLSPALFGAFLVVLQLSYTAASMVAARWMGGDAEFGTILGLLVWLRIVNIVVQVIAIA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MVFVIAPLAVLFNFAAALYGLYVLAHFTKEGFGLSSLGKSAGVILLAGLGAMIAVLILMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHH LFAPTILETSNV HHHHHHHHCCCC >Mature Secondary Structure MNFKDLLVETIVNPASAARRIMALNLTDEVVWTGFALNVVLSVLLYAGQGVLLGDPSNAL CCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC FPGLSPALFGAFLVVLQLSYTAASMVAARWMGGDAEFGTILGLLVWLRIVNIVVQVIAIA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MVFVIAPLAVLFNFAAALYGLYVLAHFTKEGFGLSSLGKSAGVILLAGLGAMIAVLILMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHH LFAPTILETSNV HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA