Click here to switch to the map view.

The map label for this gene is ybjQ [C]

Identifier: 99081084

GI number: 99081084

Start: 1338500

End: 1338814

Strand: Direct

Name: ybjQ [C]

Synonym: TM1040_1243

Alternate gene names: 99081084

Gene position: 1338500-1338814 (Clockwise)

Preceding gene: 99081083

Following gene: 99081085

Centisome position: 41.82

GC content: 57.46

Gene sequence:

>315_bases
ATGATCGTCACGACAACAAATAGCGTCGAAGGCTACCAGATCTCCGAGTACAAAGGCATCGTCGTGGGCGAGGCAATCAT
GGGTGCCAATGTTGTGCGCGATGTATTTGCCCAGATCACCGACATTGTTGGCGGTAGATCAGGCGCTTATGAGAGCAAGC
TGCAGGACGCGCGCGAGACGGCTTTGAGCGAACTCGAAGACCGGGCGCGTGCGCTTGGCGCGAATGCGGTTGTGGGGGTC
GACCTCGATTATGAAGTTGTCGGGCAATCGATGCTCATGGTCTCTGCCAGCGGCACCGCTGTCGTGATCGGCTAA

Upstream 100 bases:

>100_bases
TGGAATTTGCGATGGAAGCGCAGCAGCTTGTTGCAATCTCCCTTGAGGGCTCGGTCGGCTAATGGCCGGCCCCTGGCAAA
CGAGCGAAGGAGCGACCTCC

Downstream 100 bases:

>100_bases
AGAGGAAACGCCGTGCTGTTTGACCCTTCAAAACTCCCTGACATTGTTGCCCGGATCTCTTCCGGGCAATCCGTGGGGTT
TGCGGATGTGTCGCTCTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MIVTTTNSVEGYQISEYKGIVVGEAIMGANVVRDVFAQITDIVGGRSGAYESKLQDARETALSELEDRARALGANAVVGV
DLDYEVVGQSMLMVSASGTAVVIG

Sequences:

>Translated_104_residues
MIVTTTNSVEGYQISEYKGIVVGEAIMGANVVRDVFAQITDIVGGRSGAYESKLQDARETALSELEDRARALGANAVVGV
DLDYEVVGQSMLMVSASGTAVVIG
>Mature_104_residues
MIVTTTNSVEGYQISEYKGIVVGEAIMGANVVRDVFAQITDIVGGRSGAYESKLQDARETALSELEDRARALGANAVVGV
DLDYEVVGQSMLMVSASGTAVVIG

Specific function: Unknown

COG id: COG0393

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0145 family

Homologues:

Organism=Escherichia coli, GI1787091, Length=103, Percent_Identity=66.0194174757282, Blast_Score=129, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1243_SILST (Q1GH90)

Other databases:

- EMBL:   CP000377
- RefSeq:   YP_613238.1
- ProteinModelPortal:   Q1GH90
- SMR:   Q1GH90
- STRING:   Q1GH90
- GeneID:   4076358
- GenomeReviews:   CP000377_GR
- KEGG:   sit:TM1040_1243
- NMPDR:   fig|292414.1.peg.3626
- eggNOG:   COG0393
- HOGENOM:   HBG339160
- OMA:   DFEISMP
- PhylomeDB:   Q1GH90
- ProtClustDB:   CLSK933719
- BioCyc:   SSP292414:TM1040_1243-MONOMER
- HAMAP:   MF_00338
- InterPro:   IPR002765
- Gene3D:   G3DSA:3.30.110.70

Pfam domain/function: PF01906 DUF74

EC number: NA

Molecular weight: Translated: 10856; Mature: 10856

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVTTTNSVEGYQISEYKGIVVGEAIMGANVVRDVFAQITDIVGGRSGAYESKLQDARET
CEEECCCCCCCEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALSELEDRARALGANAVVGVDLDYEVVGQSMLMVSASGTAVVIG
HHHHHHHHHHHCCCCEEEECCCCHHHHCCEEEEEECCCCEEEEC
>Mature Secondary Structure
MIVTTTNSVEGYQISEYKGIVVGEAIMGANVVRDVFAQITDIVGGRSGAYESKLQDARET
CEEECCCCCCCEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALSELEDRARALGANAVVGVDLDYEVVGQSMLMVSASGTAVVIG
HHHHHHHHHHHCCCCEEEECCCCHHHHCCEEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA