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The map label for this gene is sufB [C]

Identifier: 99081083

GI number: 99081083

Start: 1336941

End: 1338461

Strand: Direct

Name: sufB [C]

Synonym: TM1040_1242

Alternate gene names: 99081083

Gene position: 1336941-1338461 (Clockwise)

Preceding gene: 99081082

Following gene: 99081084

Centisome position: 41.77

GC content: 55.82

Gene sequence:

>1521_bases
ATGGCCGCTCTGGACCAATTCGAAGCCAAGGAAGGCGTTGATCAGGAAACCGTGGATGCGGTGCGCGAGGTCAGCACATA
TAAATACGGCTGGGACACCGATATCGAGATGGAATACGCCCCCAAAGGCGTGAACCAGGATATCGTGCGCCTGATTTCCG
AGAAAAATGAAGAGCCTGAGTGGATGACCGAATGGCGTCTTCAGGCCTTTGAGCGCTGGGAAGGCATGAAAGAGCCGAAC
TGGGCGATGGTGAACTACCCTGAAATCGACTTTCAGAACCAGTATTACTACGCCCGTCCCAAGAGCATGGAAGTGAAGCC
GAAGTCGCTGGATGAAGTCGATCCAAAGCTGCTTGCTACTTACGAAAAGCTCGGCATCCCCTTGAAAGAGCAGATGATTC
TTGCGGGTGTTGAGGGCGCAGAGGATGCCCCCGCAGAGGGCCGCAAGGTGGCTGTGGATGCGGTGTTTGACTCCGTGTCT
GTCGGCACGACCTTTCAGGACGAACTCAAGAAGGCTGGCGTGATCTTCTGTTCCATCTCCGAAGCCATCCGCGAGCATCC
CGAGCTGGTCAAGAAATACCTCGGCTCGGTGGTCCCGGTGTCGGACAACTTCTACGCCACACTGAACTCGGCCGTGTTCT
CTGATGGGTCCTTTGTGTATGTGCCGCCGGGCGTGCGCTGCCCGATGGAACTTAGCACCTATTTCCGCATCAATGCCGAA
AACACCGGACAGTTTGAGCGGACGCTGATCATTGCCGATAAAGGCAGCTATGTCAGCTACTTGGAAGGTTGTACTGCACC
ACAGCGTGACACTGCGCAGCTGCATGCTGCCGTGGTTGAGATCATCATCGAAGAAGATGCCGAGGTGAAATATTCCACCG
TGCAGAACTGGTTCCCCGGCGATGAGAACGGCAAGGGAGGCATCTACAACTTCGTGACCAAACGTGCCGATTGCCGCGGC
GACCGCTCCAAGGTGATGTGGACGCAGGTTGAGACCGGCTCTGCAGTGACTTGGAAGTATCCCTCCTGCATTTTGCGCGG
CAATGAAAGCCAGGGCGAGTTTTATTCCATCGCCATCGCCAACAACATGCAGCAGGCCGATACGGGCACCAAGATGATCC
ACCTTGGCAAGGACACCAAGAGCCGGATCGTGTCCAAAGGGATCTCTGCCGGCAAGGCGCAGAACACCTATCGCGGTCTG
GTGTCGATGCACCCAAAGGCCAAGAATTCGCGCAATTATACCCAGTGCGACAGCTTGCTGATCGGCGACAAATGTGGCGC
GCATACAGTGCCTTACATTGAGGTCAAGAACAATTCCTCGCGCTGCGAACACGAGGCGACAACCTCCAAGGTGGATGATG
ATCAGCTGTTCTACTGCCGCCAGCGCGGTATGGACGAAGAAGAAGCGGTTGCACTGGTCGTGAACGGTTTCTGCAAGGAC
GTCCTACAGGCTCTGCCGATGGAATTTGCGATGGAAGCGCAGCAGCTTGTTGCAATCTCCCTTGAGGGCTCGGTCGGCTA
A

Upstream 100 bases:

>100_bases
GGCTGACACGACCGAAACGGATGTGCTGCGGTTTGCAGAAACGTGGTGCGCCAAACAGAAGAAACATCGCGCCCGCTCGG
CGTGAGTGCAGGAGAAGACG

Downstream 100 bases:

>100_bases
TGGCCGGCCCCTGGCAAACGAGCGAAGGAGCGACCTCCATGATCGTCACGACAACAAATAGCGTCGAAGGCTACCAGATC
TCCGAGTACAAAGGCATCGT

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MAALDQFEAKEGVDQETVDAVREVSTYKYGWDTDIEMEYAPKGVNQDIVRLISEKNEEPEWMTEWRLQAFERWEGMKEPN
WAMVNYPEIDFQNQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLKEQMILAGVEGAEDAPAEGRKVAVDAVFDSVS
VGTTFQDELKKAGVIFCSISEAIREHPELVKKYLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAE
NTGQFERTLIIADKGSYVSYLEGCTAPQRDTAQLHAAVVEIIIEEDAEVKYSTVQNWFPGDENGKGGIYNFVTKRADCRG
DRSKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKMIHLGKDTKSRIVSKGISAGKAQNTYRGL
VSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRCEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKD
VLQALPMEFAMEAQQLVAISLEGSVG

Sequences:

>Translated_506_residues
MAALDQFEAKEGVDQETVDAVREVSTYKYGWDTDIEMEYAPKGVNQDIVRLISEKNEEPEWMTEWRLQAFERWEGMKEPN
WAMVNYPEIDFQNQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLKEQMILAGVEGAEDAPAEGRKVAVDAVFDSVS
VGTTFQDELKKAGVIFCSISEAIREHPELVKKYLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAE
NTGQFERTLIIADKGSYVSYLEGCTAPQRDTAQLHAAVVEIIIEEDAEVKYSTVQNWFPGDENGKGGIYNFVTKRADCRG
DRSKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKMIHLGKDTKSRIVSKGISAGKAQNTYRGL
VSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRCEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKD
VLQALPMEFAMEAQQLVAISLEGSVG
>Mature_505_residues
AALDQFEAKEGVDQETVDAVREVSTYKYGWDTDIEMEYAPKGVNQDIVRLISEKNEEPEWMTEWRLQAFERWEGMKEPNW
AMVNYPEIDFQNQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLKEQMILAGVEGAEDAPAEGRKVAVDAVFDSVSV
GTTFQDELKKAGVIFCSISEAIREHPELVKKYLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAEN
TGQFERTLIIADKGSYVSYLEGCTAPQRDTAQLHAAVVEIIIEEDAEVKYSTVQNWFPGDENGKGGIYNFVTKRADCRGD
RSKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKMIHLGKDTKSRIVSKGISAGKAQNTYRGLV
SMHPKAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRCEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDV
LQALPMEFAMEAQQLVAISLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=492, Percent_Identity=59.1463414634146, Blast_Score=627, Evalue=0.0,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=28.1045751633987, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 56582; Mature: 56451

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALDQFEAKEGVDQETVDAVREVSTYKYGWDTDIEMEYAPKGVNQDIVRLISEKNEEPE
CCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCH
WMTEWRLQAFERWEGMKEPNWAMVNYPEIDFQNQYYYARPKSMEVKPKSLDEVDPKLLAT
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHH
YEKLGIPLKEQMILAGVEGAEDAPAEGRKVAVDAVFDSVSVGTTFQDELKKAGVIFCSIS
HHHHCCCHHHHEEEEECCCCCCCCCCCCEEEEEEHHCCCCCCCCCHHHHHHCCEEEEEHH
EAIREHPELVKKYLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAE
HHHHHCHHHHHHHHCCEECCCCCCEEEECHHEECCCCEEEECCCCCCCCEEEEEEEEECC
NTGQFERTLIIADKGSYVSYLEGCTAPQRDTAQLHAAVVEIIIEEDAEVKYSTVQNWFPG
CCCCEEEEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCC
DENGKGGIYNFVTKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIA
CCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCEEEECCCCCCCEEEEEEE
NNMQQADTGTKMIHLGKDTKSRIVSKGISAGKAQNTYRGLVSMHPKAKNSRNYTQCDSLL
CCCHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCCCHHHHCEE
IGDKCGAHTVPYIEVKNNSSRCEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKD
ECCCCCCCCCCEEEECCCCCCCCHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
VLQALPMEFAMEAQQLVAISLEGSVG
HHHHCCHHHHHCCCEEEEEEECCCCC
>Mature Secondary Structure 
AALDQFEAKEGVDQETVDAVREVSTYKYGWDTDIEMEYAPKGVNQDIVRLISEKNEEPE
CCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCH
WMTEWRLQAFERWEGMKEPNWAMVNYPEIDFQNQYYYARPKSMEVKPKSLDEVDPKLLAT
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHH
YEKLGIPLKEQMILAGVEGAEDAPAEGRKVAVDAVFDSVSVGTTFQDELKKAGVIFCSIS
HHHHCCCHHHHEEEEECCCCCCCCCCCCEEEEEEHHCCCCCCCCCHHHHHHCCEEEEEHH
EAIREHPELVKKYLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAE
HHHHHCHHHHHHHHCCEECCCCCCEEEECHHEECCCCEEEECCCCCCCCEEEEEEEEECC
NTGQFERTLIIADKGSYVSYLEGCTAPQRDTAQLHAAVVEIIIEEDAEVKYSTVQNWFPG
CCCCEEEEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCC
DENGKGGIYNFVTKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIA
CCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCEEEECCCCCCCEEEEEEE
NNMQQADTGTKMIHLGKDTKSRIVSKGISAGKAQNTYRGLVSMHPKAKNSRNYTQCDSLL
CCCHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCCCHHHHCEE
IGDKCGAHTVPYIEVKNNSSRCEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKD
ECCCCCCCCCCEEEECCCCCCCCHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
VLQALPMEFAMEAQQLVAISLEGSVG
HHHHCCHHHHHCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]