Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080661

Identifier: 99080661

GI number: 99080661

Start: 863936

End: 864880

Strand: Direct

Name: 99080661

Synonym: TM1040_0820

Alternate gene names: NA

Gene position: 863936-864880 (Clockwise)

Preceding gene: 99080660

Following gene: 99080662

Centisome position: 26.99

GC content: 56.83

Gene sequence:

>945_bases
ATGAGCCTGAGAATGATCGAGCCAGAGACGATTGACGACGCCGCATTTGTGTCCTCGACCGTTCCCGAAACTGACGCGCC
CGTCTGGGATGTATCAACTGACTATCCGTTCTCTGATCCGGACAACCCAGAAGAGGTGATTGTCGAAGAGGGGCAGCATG
CGATCTACCGCGCTGTCGCTCCCTCGGGGCCCAGCCATGGTGGCGCAGTCGATCCTGCCACCGACACGGGGAACACCAAA
TGGGTGAAAATCCGCTCTACCAACCGTTGGCGGGTCTTCGATGAGTATATCGGCGACCCGAGTGTCCAGGCAAATAGCGC
GCAATGGGTGATAACCGCGCCCAACGTGATCGACAGTGTGGCTTTGTTCGGGCTCTACGCTCTGTCGGTGACGGTCCTTG
TTCGCGACAGTGGTGGGGCCGAGGTCTACAATCAGACATACTCACTGCAGGATGAGAACAGTGTGGTTGATCTCTACACC
TACCTCACCAGCCCGATTATCCTCAGTGACCGCTTGGTCATCACAGATATTCCGCCCTACGCGGGTGCAAAGGTGACTGT
CACTGCGGAGGCATCCGGAGAGGACATAGAGGTCGGGCAGATCGTGATCGGCCGGAAAGAAGAGCTCGGCGTCACGATTG
ATGAGATCCCGCTGTCTATTCAGGACTTCTCCCGCAAAGAGCGCGACCCTGATTTTGGTCGGGTGTCGCTGTTGGAGAAG
GACTTTGCGGACGAAATGCCCGTCGCATTTGTCTTCCCGACCTCGCGCGCTTCCTACCTGAAAAGCCGTCTGGCAAGCCG
TCGTGCCAAACTGACGGTCTACAGCAGCGATGGGCCGTACAAGGCCAATGAGTTTTCCGTCTACGGATTTTATCAGTCCT
TTCAGGTCGTTCCCCGCATCGGGATCGAGTCTGAGGGCATTCTCGAACTGGAGAGTATCACATGA

Upstream 100 bases:

>100_bases
TTCTGGAGTCCCATGCGCGCGCAACGACTTACAACACAGGCAAGTCGATGCGGACGCACACCAAATGGGACAGAGATGGT
GTGCCGAAGGAGCGGACTTA

Downstream 100 bases:

>100_bases
GCGATCCGACGATCACACCGCCGCCAGATGCACCATCTCGTCAGCAGCCGTCTACCTTCTCCGCGCGGGGAGATGCGTTC
TTTGCCTGGATGGTCACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSLRMIEPETIDDAAFVSSTVPETDAPVWDVSTDYPFSDPDNPEEVIVEEGQHAIYRAVAPSGPSHGGAVDPATDTGNTK
WVKIRSTNRWRVFDEYIGDPSVQANSAQWVITAPNVIDSVALFGLYALSVTVLVRDSGGAEVYNQTYSLQDENSVVDLYT
YLTSPIILSDRLVITDIPPYAGAKVTVTAEASGEDIEVGQIVIGRKEELGVTIDEIPLSIQDFSRKERDPDFGRVSLLEK
DFADEMPVAFVFPTSRASYLKSRLASRRAKLTVYSSDGPYKANEFSVYGFYQSFQVVPRIGIESEGILELESIT

Sequences:

>Translated_314_residues
MSLRMIEPETIDDAAFVSSTVPETDAPVWDVSTDYPFSDPDNPEEVIVEEGQHAIYRAVAPSGPSHGGAVDPATDTGNTK
WVKIRSTNRWRVFDEYIGDPSVQANSAQWVITAPNVIDSVALFGLYALSVTVLVRDSGGAEVYNQTYSLQDENSVVDLYT
YLTSPIILSDRLVITDIPPYAGAKVTVTAEASGEDIEVGQIVIGRKEELGVTIDEIPLSIQDFSRKERDPDFGRVSLLEK
DFADEMPVAFVFPTSRASYLKSRLASRRAKLTVYSSDGPYKANEFSVYGFYQSFQVVPRIGIESEGILELESIT
>Mature_313_residues
SLRMIEPETIDDAAFVSSTVPETDAPVWDVSTDYPFSDPDNPEEVIVEEGQHAIYRAVAPSGPSHGGAVDPATDTGNTKW
VKIRSTNRWRVFDEYIGDPSVQANSAQWVITAPNVIDSVALFGLYALSVTVLVRDSGGAEVYNQTYSLQDENSVVDLYTY
LTSPIILSDRLVITDIPPYAGAKVTVTAEASGEDIEVGQIVIGRKEELGVTIDEIPLSIQDFSRKERDPDFGRVSLLEKD
FADEMPVAFVFPTSRASYLKSRLASRRAKLTVYSSDGPYKANEFSVYGFYQSFQVVPRIGIESEGILELESIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34541; Mature: 34410

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRMIEPETIDDAAFVSSTVPETDAPVWDVSTDYPFSDPDNPEEVIVEEGQHAIYRAVA
CCCEECCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHEECCCEEEEEEEC
PSGPSHGGAVDPATDTGNTKWVKIRSTNRWRVFDEYIGDPSVQANSAQWVITAPNVIDSV
CCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEHHHHCCCCCCCCCCCEEEEECCHHHHHH
ALFGLYALSVTVLVRDSGGAEVYNQTYSLQDENSVVDLYTYLTSPIILSDRLVITDIPPY
HHHHHHEEEEEEEEECCCCCEEECCEECCCCCCCEEEEEHHHCCCEEEECCEEEEECCCC
AGAKVTVTAEASGEDIEVGQIVIGRKEELGVTIDEIPLSIQDFSRKERDPDFGRVSLLEK
CCCEEEEEECCCCCCEEECEEEECCHHHHCEEHHHCCCCHHHHHHHCCCCCCCEEEHHHH
DFADEMPVAFVFPTSRASYLKSRLASRRAKLTVYSSDGPYKANEFSVYGFYQSFQVVPRI
HHHCCCCEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEEECC
GIESEGILELESIT
CCCCCCEEEEECCC
>Mature Secondary Structure 
SLRMIEPETIDDAAFVSSTVPETDAPVWDVSTDYPFSDPDNPEEVIVEEGQHAIYRAVA
CCEECCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHEECCCEEEEEEEC
PSGPSHGGAVDPATDTGNTKWVKIRSTNRWRVFDEYIGDPSVQANSAQWVITAPNVIDSV
CCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEHHHHCCCCCCCCCCCEEEEECCHHHHHH
ALFGLYALSVTVLVRDSGGAEVYNQTYSLQDENSVVDLYTYLTSPIILSDRLVITDIPPY
HHHHHHEEEEEEEEECCCCCEEECCEECCCCCCCEEEEEHHHCCCEEEECCEEEEECCCC
AGAKVTVTAEASGEDIEVGQIVIGRKEELGVTIDEIPLSIQDFSRKERDPDFGRVSLLEK
CCCEEEEEECCCCCCEEECEEEECCHHHHCEEHHHCCCCHHHHHHHCCCCCCCEEEHHHH
DFADEMPVAFVFPTSRASYLKSRLASRRAKLTVYSSDGPYKANEFSVYGFYQSFQVVPRI
HHHCCCCEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEEECC
GIESEGILELESIT
CCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA