Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080643

Identifier: 99080643

GI number: 99080643

Start: 849590

End: 850969

Strand: Direct

Name: 99080643

Synonym: TM1040_0802

Alternate gene names: NA

Gene position: 849590-850969 (Clockwise)

Preceding gene: 99080642

Following gene: 99080644

Centisome position: 26.54

GC content: 61.09

Gene sequence:

>1380_bases
TTGACCCAATCCGTCGCACAACGCACCCCCGCAGCCGAGGCGCTGGTCAAGAGCGCCGCTCTGGGCCGAATCCTGATGGG
TGGCACCAAGGCCATGCGTGGAGCGGGTCAAAAGCACCTGCCGAAGTTTCCAGCAGAGAGCCACGAGGCATACGAGGCCC
GCCTCGCGTCGTCGTTCCTGTTCAACGGCTTCAAAAAGACCGTGCGCGATATGACCGGCCGGGTATTCACCAAGTCGGTT
GAGATCGAGAGCGACACGCTCAAAGAGGAAGAGCAGAACATCGACATGCAGGGCCGCGACCTTTCGGCCTTTGCGCGTGA
CGTGTTTGAGGCAGGCTTGAGCGGCTGCGGACTGTCTTTCATCATGGTTGATGCCCCGCCGCGCCAGGGTGACGTGACCA
AGGCACAGGCTCAAGCGTCAAACCTTCGGCCCTATCTCGTGCATGTGAAGGTAGAGGAAGTGCTGGGCTGGAAAACTGCC
ACCGAGGGCAGCCGCACGTTTCTGAGCCAATGGCGCATGATGGAAACGCTGGAGCTTGATGACCCGGAGGACGAGTTCTC
CGTAGCGTCCATGAAGCAAGTGCGCGTGCTGACGTTGGTAGAGGGCCGGGTGAACGTCCGCCTCTACCGCGAGGCCGACA
AGGGCGCAAACTGGGAGCTACACGCAGAGTTCGACACTCAGGCCACCGAGATCACCGTTGTGCCGTTCTACGCCAACCGC
ACAGGCTTCTTCGCCGCCGAGCCTCCTCTAGAGGATCTTGCAGACAAGAACGTCGAGCATTGGCAGAGCGCCAGCGATCA
GCGCAACATCTTGCATTTCGCCCGGGTGCCGATCCTCTTCGCATCTGGTCGAGACGATGAAAGTCCGCTGACCTTCAGCG
CGAGTGCGGCGACGACAGCGCGCGACCCGAACGCCAAGCTGGAATGGGTCGAGCATTCTGGCGCAGCAATCGGGGCAGGG
CGTGACGACCTCAAAGATCTGGAATTTCAGATGCAGGTACTCGGCTTGCAACTTTTGGTGGCCGGTACGGAAACGGCGAC
GGGGGCCTCTCTTGACGCGGCAAAGGAGACAGCGCCGCTCGCAATGATGGCCGACAACCTCAAGGACAGCCTCGAACAGG
CGCTGCGCTGGTTTACGATGTACCAGGGCAGCGAGAACGCTGTGACGGTTAAGGTCAACAAGGACTTCGGCGTCTCGATG
CTGACCGCGCAGGAACTGACGGTGATGCTGACCGCTGTGAATACCGGCAACATGCCCCGCCGGGTGTTCGTTGAGGAAAT
GAAGCGCCGCGGCTTCATCGCCGAGGACACCGATACGGACGCATATCTGGGCGATCTGGACGACGAAACGCCGCCGGGGC
TCACCGATGGCGGTGAATGA

Upstream 100 bases:

>100_bases
AATCCGCCGGTCTCGACCACCACCCAGACGCGGGCGGCTATTTCGTCCACCAGAAAATGCCGGTCGTGAAACCGACCTTC
ACCCGGCAGGAGCTTCGCCT

Downstream 100 bases:

>100_bases
CGACCTCGCGGACGAACTGATCCGTCATCAGGTCTATCTACAGCGCTTCGGAAACGCTACGGCCCGCAAGGTTCTGGCGC
TGCTCAAGCGGTCTGACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MTQSVAQRTPAAEALVKSAALGRILMGGTKAMRGAGQKHLPKFPAESHEAYEARLASSFLFNGFKKTVRDMTGRVFTKSV
EIESDTLKEEEQNIDMQGRDLSAFARDVFEAGLSGCGLSFIMVDAPPRQGDVTKAQAQASNLRPYLVHVKVEEVLGWKTA
TEGSRTFLSQWRMMETLELDDPEDEFSVASMKQVRVLTLVEGRVNVRLYREADKGANWELHAEFDTQATEITVVPFYANR
TGFFAAEPPLEDLADKNVEHWQSASDQRNILHFARVPILFASGRDDESPLTFSASAATTARDPNAKLEWVEHSGAAIGAG
RDDLKDLEFQMQVLGLQLLVAGTETATGASLDAAKETAPLAMMADNLKDSLEQALRWFTMYQGSENAVTVKVNKDFGVSM
LTAQELTVMLTAVNTGNMPRRVFVEEMKRRGFIAEDTDTDAYLGDLDDETPPGLTDGGE

Sequences:

>Translated_459_residues
MTQSVAQRTPAAEALVKSAALGRILMGGTKAMRGAGQKHLPKFPAESHEAYEARLASSFLFNGFKKTVRDMTGRVFTKSV
EIESDTLKEEEQNIDMQGRDLSAFARDVFEAGLSGCGLSFIMVDAPPRQGDVTKAQAQASNLRPYLVHVKVEEVLGWKTA
TEGSRTFLSQWRMMETLELDDPEDEFSVASMKQVRVLTLVEGRVNVRLYREADKGANWELHAEFDTQATEITVVPFYANR
TGFFAAEPPLEDLADKNVEHWQSASDQRNILHFARVPILFASGRDDESPLTFSASAATTARDPNAKLEWVEHSGAAIGAG
RDDLKDLEFQMQVLGLQLLVAGTETATGASLDAAKETAPLAMMADNLKDSLEQALRWFTMYQGSENAVTVKVNKDFGVSM
LTAQELTVMLTAVNTGNMPRRVFVEEMKRRGFIAEDTDTDAYLGDLDDETPPGLTDGGE
>Mature_458_residues
TQSVAQRTPAAEALVKSAALGRILMGGTKAMRGAGQKHLPKFPAESHEAYEARLASSFLFNGFKKTVRDMTGRVFTKSVE
IESDTLKEEEQNIDMQGRDLSAFARDVFEAGLSGCGLSFIMVDAPPRQGDVTKAQAQASNLRPYLVHVKVEEVLGWKTAT
EGSRTFLSQWRMMETLELDDPEDEFSVASMKQVRVLTLVEGRVNVRLYREADKGANWELHAEFDTQATEITVVPFYANRT
GFFAAEPPLEDLADKNVEHWQSASDQRNILHFARVPILFASGRDDESPLTFSASAATTARDPNAKLEWVEHSGAAIGAGR
DDLKDLEFQMQVLGLQLLVAGTETATGASLDAAKETAPLAMMADNLKDSLEQALRWFTMYQGSENAVTVKVNKDFGVSML
TAQELTVMLTAVNTGNMPRRVFVEEMKRRGFIAEDTDTDAYLGDLDDETPPGLTDGGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50477; Mature: 50346

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSVAQRTPAAEALVKSAALGRILMGGTKAMRGAGQKHLPKFPAESHEAYEARLASSFL
CCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHH
FNGFKKTVRDMTGRVFTKSVEIESDTLKEEEQNIDMQGRDLSAFARDVFEAGLSGCGLSF
HHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEE
IMVDAPPRQGDVTKAQAQASNLRPYLVHVKVEEVLGWKTATEGSRTFLSQWRMMETLELD
EEEECCCCCCCCHHHHHHHCCCCEEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
DPEDEFSVASMKQVRVLTLVEGRVNVRLYREADKGANWELHAEFDTQATEITVVPFYANR
CCCCHHHHHHHHHEEEEEEECCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEEEEECCC
TGFFAAEPPLEDLADKNVEHWQSASDQRNILHFARVPILFASGRDDESPLTFSASAATTA
CCCEECCCCHHHHHCCCHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCC
RDPNAKLEWVEHSGAAIGAGRDDLKDLEFQMQVLGLQLLVAGTETATGASLDAAKETAPL
CCCCCCEEEEECCCCEECCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHCCCH
AMMADNLKDSLEQALRWFTMYQGSENAVTVKVNKDFGVSMLTAQELTVMLTAVNTGNMPR
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCEEEEEEEECCCCCCH
RVFVEEMKRRGFIAEDTDTDAYLGDLDDETPPGLTDGGE
HHHHHHHHHCCCEECCCCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TQSVAQRTPAAEALVKSAALGRILMGGTKAMRGAGQKHLPKFPAESHEAYEARLASSFL
CCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHH
FNGFKKTVRDMTGRVFTKSVEIESDTLKEEEQNIDMQGRDLSAFARDVFEAGLSGCGLSF
HHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEE
IMVDAPPRQGDVTKAQAQASNLRPYLVHVKVEEVLGWKTATEGSRTFLSQWRMMETLELD
EEEECCCCCCCCHHHHHHHCCCCEEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
DPEDEFSVASMKQVRVLTLVEGRVNVRLYREADKGANWELHAEFDTQATEITVVPFYANR
CCCCHHHHHHHHHEEEEEEECCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEEEEECCC
TGFFAAEPPLEDLADKNVEHWQSASDQRNILHFARVPILFASGRDDESPLTFSASAATTA
CCCEECCCCHHHHHCCCHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCC
RDPNAKLEWVEHSGAAIGAGRDDLKDLEFQMQVLGLQLLVAGTETATGASLDAAKETAPL
CCCCCCEEEEECCCCEECCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHCCCH
AMMADNLKDSLEQALRWFTMYQGSENAVTVKVNKDFGVSMLTAQELTVMLTAVNTGNMPR
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCEEEEEEEECCCCCCH
RVFVEEMKRRGFIAEDTDTDAYLGDLDDETPPGLTDGGE
HHHHHHHHHCCCEECCCCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA