Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080543

Identifier: 99080543

GI number: 99080543

Start: 751184

End: 751918

Strand: Reverse

Name: 99080543

Synonym: TM1040_0702

Alternate gene names: NA

Gene position: 751918-751184 (Counterclockwise)

Preceding gene: 99080545

Following gene: 99080542

Centisome position: 23.49

GC content: 59.05

Gene sequence:

>735_bases
ATGATCTTAAGATCAACAAAGTGGGCCATCGCTCTGAGTGTCTCGTTTTTAATGGCGGGCATGGACAGCGCGCGGGCAGA
GGCGATCAAAGCGTACACCGCAGCCCTACCGCCCTACACGATCGCACCGGACCTCGAGATGCCGGGAATCTCTCACGAGA
TTTTGGAAGAGATGTCGAAACGCTCGGGCGTGACAATCGAGATCGAATATCTTCCTTGGAAGCGCGCGCAATCGATGGCG
CAGAAAACGCCGAACGCCCTGCTTTTTACCGCCGCGCGCACCGAGTCGCGTGAAACCGTCTACAAGTGGATCGCAGAGTT
TATTGTGGCTGACGAAGTATTCGCGACCACCACCGAGGCGGTGAACTCTCTTGAGGACGCGCGCCAGCTCTCTCGAATTG
CCACACTTGGGGGGGCGCCACGAGAAAAACGGCTCGCAAAGCTGGAGTTCGGCAATGTGCAGTCCACCCCCGATACCGCG
ACGGCTGCACGTCTCTTGACCGGCGGGCGCGTGGATGCCTGGTTCACACTGAGTCAGCGCGTCCTGCACGCCGTGAAGTC
AGAGGGGCTCGACCCGAGCACCATCGTGATCGGCACACCGGTGGGCAGTCTGCGCCTTTGGCTGGCTTCAAACGCCGAAT
TCGATCCCGAAGTCGCCGCCAAACTTGCGCAGGCCTTTGAAGATATGAAAGCTGATGGCAGCTACGAGGCCATCGTCAGC
GCCTATCTGAACTGA

Upstream 100 bases:

>100_bases
CTTAATCTGAAACCCGCTTACTCAAAGTGACGCTGGGTCAATCATTTGCTTGCAGAGATCCGAATTGGCGTCTCGGCAAT
GAATATGAGGTTTCTGTTTC

Downstream 100 bases:

>100_bases
TCTTGGCGACAAACCTTGCCTGACTGGCGTCCCGTATGGGGCGCCAGTCCCGCGTTTCGAAGGGCAAGAACACCGCTCGC
CGCCATTGCCCCTTGCTCCT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: Amino Acid ABC Transporter; ABC-Type Amino Acid Transporter

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MILRSTKWAIALSVSFLMAGMDSARAEAIKAYTAALPPYTIAPDLEMPGISHEILEEMSKRSGVTIEIEYLPWKRAQSMA
QKTPNALLFTAARTESRETVYKWIAEFIVADEVFATTTEAVNSLEDARQLSRIATLGGAPREKRLAKLEFGNVQSTPDTA
TAARLLTGGRVDAWFTLSQRVLHAVKSEGLDPSTIVIGTPVGSLRLWLASNAEFDPEVAAKLAQAFEDMKADGSYEAIVS
AYLN

Sequences:

>Translated_244_residues
MILRSTKWAIALSVSFLMAGMDSARAEAIKAYTAALPPYTIAPDLEMPGISHEILEEMSKRSGVTIEIEYLPWKRAQSMA
QKTPNALLFTAARTESRETVYKWIAEFIVADEVFATTTEAVNSLEDARQLSRIATLGGAPREKRLAKLEFGNVQSTPDTA
TAARLLTGGRVDAWFTLSQRVLHAVKSEGLDPSTIVIGTPVGSLRLWLASNAEFDPEVAAKLAQAFEDMKADGSYEAIVS
AYLN
>Mature_244_residues
MILRSTKWAIALSVSFLMAGMDSARAEAIKAYTAALPPYTIAPDLEMPGISHEILEEMSKRSGVTIEIEYLPWKRAQSMA
QKTPNALLFTAARTESRETVYKWIAEFIVADEVFATTTEAVNSLEDARQLSRIATLGGAPREKRLAKLEFGNVQSTPDTA
TAARLLTGGRVDAWFTLSQRVLHAVKSEGLDPSTIVIGTPVGSLRLWLASNAEFDPEVAAKLAQAFEDMKADGSYEAIVS
AYLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26614; Mature: 26614

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILRSTKWAIALSVSFLMAGMDSARAEAIKAYTAALPPYTIAPDLEMPGISHEILEEMSK
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
RSGVTIEIEYLPWKRAQSMAQKTPNALLFTAARTESRETVYKWIAEFIVADEVFATTTEA
HCCCEEEEEECCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VNSLEDARQLSRIATLGGAPREKRLAKLEFGNVQSTPDTATAARLLTGGRVDAWFTLSQR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
VLHAVKSEGLDPSTIVIGTPVGSLRLWLASNAEFDPEVAAKLAQAFEDMKADGSYEAIVS
HHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
AYLN
HHCC
>Mature Secondary Structure
MILRSTKWAIALSVSFLMAGMDSARAEAIKAYTAALPPYTIAPDLEMPGISHEILEEMSK
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
RSGVTIEIEYLPWKRAQSMAQKTPNALLFTAARTESRETVYKWIAEFIVADEVFATTTEA
HCCCEEEEEECCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VNSLEDARQLSRIATLGGAPREKRLAKLEFGNVQSTPDTATAARLLTGGRVDAWFTLSQR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
VLHAVKSEGLDPSTIVIGTPVGSLRLWLASNAEFDPEVAAKLAQAFEDMKADGSYEAIVS
HHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
AYLN
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA