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The map label for this gene is recN [H]

Identifier: 99080533

GI number: 99080533

Start: 742178

End: 743827

Strand: Direct

Name: recN [H]

Synonym: TM1040_0692

Alternate gene names: 99080533

Gene position: 742178-743827 (Clockwise)

Preceding gene: 99080532

Following gene: 99080534

Centisome position: 23.19

GC content: 64.55

Gene sequence:

>1650_bases
ATGCTGCGCGCGCTTGATATTCGCGACCTTCTGATCATCGACCATCTGGAGCTGTCGTTCCAGCCGGGTCTGAACGTGCT
GACCGGGGAAACCGGCGCCGGTAAATCCATCCTTCTTGACTCTCTGGGCTTTGTGCTGGGCTGGCGCGGGCGGGCCGCTC
TGGTGCGGCAAGGGGCGGATCAGGGCGAGGTCGTGGCCGAGTTCGATCTGCCGGAAGGGCACGCGGCGCGTGCGGTACTC
GAGGAAGCAGGGCTGCCGGTCTCTGACACATTGCTGCTGCGACGCGTGAACACGTCAGATGGGCGCAAGACCGCCTGGGT
GAATGATCGACGCTGCTCTGGCGAAGTTCTGCGGGCGCTCTCGGACACATTGCTGGAGCTGCATGGTCAGCACGACGATC
GAGGTCTGCTGAACCCGCGTGGCCACCGGGCGATGCTGGATGACTTTGCCAATGTTCAGGCGCAGCTTGATGAGGTGCGC
GCTGCCTGGGGGGCCGCGGCCCGCGCCCGCAAGCAAGTGGAAGAGACCCGCGCCGCTCTGGAGAGCGTGCGTGCAGAAGA
AGAGTTCCTGCGCCATTCTGTGTCGGAGCTCGACAAACTCAGCCCCGAACCCGGCGAAGACGAAAGCCTCGACACCCGCC
GGCGCCAGATGCAGGCCGCCGAGCGCATCCGCGGCGATATTGCCCGCGCGCACGGTCTGCTATCGGAAGGCGCCGAAGGC
GCGATGGGCGAGGCGCAGCGCTGGCTTGAGGCGGTTTCCGGAGACGCAGGCGAGGCGCTTGATGCCCCGCTGGCCGCACT
GAGCCGCGCGATGATCGAACTTGGCGAAGCGCAGGATGGCGTCGAGCGCTTTCTGGAAGGATTAGATTTCAATCCCGGCG
ATTTGGAAGACTGCGAGGAGCGCCTCTTTGCCATTCGCGCATTGGCGCGCAAACATGATGTGCAGCCGGATGATCTGGCC
GATCACGCGGATGTCCTGCGCGAGAAACTGCAGGCGCTGGATGCTGGGGATCAGAACCTCGCGGACCAGGAAGATGCCCT
TCGCGCAGCGGAGGCGACGTATGCGGCGGCTGCCGAACGCCTATCGGCCAAACGGCGGGACAGTGCCGCAACGCTTGACG
CAGCCGTGATGGCAGAACTGGCGCCGCTCAAGATGGAGCGCGCAGTGTTTGAAACCAAGATCACGGAGGCCGAGCCCGGC
CCGGATGGCGTGGATGAGGTCGCGTTCACTGTTGCCACCAACCCAGGCGCGCCTGCGGGTCCGCTGAACAAGATCGCTTC
GGGTGGCGAGCTGAGCCGCTTTCTCTTGGCGCTCAAGGTCTGTTTGCGGGGCGAGGATGCCGCAAAGACGCTGATCTTTG
ACGAAATCGACCGTGGTGTTGGGGGCGCAACCGCCGATGCGGTCGGGCGCAGACTGAAGGCGCTTGCCGATGGCAGTCAG
GTATTGGTCGTCACACATTCTCCTCAGGTTGCTGCGCAAGGAGCCCACCATTGGCGGGTCCAGAAATCCGTGACCGAGGG
CGTGACGCTGTCGCAGGTGGTGCCCCTGAATGAGGGCGAGCGCGTCGATGAGATCGCGCGCATGGTCTCTGGTGACAAGA
TCACACCAGAAGCCCGCGCCGCCGCCAAAGCGCTTCTGGCAGACGTCTAA

Upstream 100 bases:

>100_bases
TCGATCAAGGGCCAATGGCTCTGACGCACAACAGGACAGCGCATTTGACTCCGGGCGGCGGACTGCGCCGCGCGGATGGC
GCTCAACACGGGGCATCTAG

Downstream 100 bases:

>100_bases
GGGTATCGGACGCTCGCAAAATTATTGTTAACTACCATGGGGTAGGTGTGGCACTGATAGGTCAGTGAACAGATCGGAGA
ACCTGGATGGCGCGACGGGA

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MLRALDIRDLLIIDHLELSFQPGLNVLTGETGAGKSILLDSLGFVLGWRGRAALVRQGADQGEVVAEFDLPEGHAARAVL
EEAGLPVSDTLLLRRVNTSDGRKTAWVNDRRCSGEVLRALSDTLLELHGQHDDRGLLNPRGHRAMLDDFANVQAQLDEVR
AAWGAAARARKQVEETRAALESVRAEEEFLRHSVSELDKLSPEPGEDESLDTRRRQMQAAERIRGDIARAHGLLSEGAEG
AMGEAQRWLEAVSGDAGEALDAPLAALSRAMIELGEAQDGVERFLEGLDFNPGDLEDCEERLFAIRALARKHDVQPDDLA
DHADVLREKLQALDAGDQNLADQEDALRAAEATYAAAAERLSAKRRDSAATLDAAVMAELAPLKMERAVFETKITEAEPG
PDGVDEVAFTVATNPGAPAGPLNKIASGGELSRFLLALKVCLRGEDAAKTLIFDEIDRGVGGATADAVGRRLKALADGSQ
VLVVTHSPQVAAQGAHHWRVQKSVTEGVTLSQVVPLNEGERVDEIARMVSGDKITPEARAAAKALLADV

Sequences:

>Translated_549_residues
MLRALDIRDLLIIDHLELSFQPGLNVLTGETGAGKSILLDSLGFVLGWRGRAALVRQGADQGEVVAEFDLPEGHAARAVL
EEAGLPVSDTLLLRRVNTSDGRKTAWVNDRRCSGEVLRALSDTLLELHGQHDDRGLLNPRGHRAMLDDFANVQAQLDEVR
AAWGAAARARKQVEETRAALESVRAEEEFLRHSVSELDKLSPEPGEDESLDTRRRQMQAAERIRGDIARAHGLLSEGAEG
AMGEAQRWLEAVSGDAGEALDAPLAALSRAMIELGEAQDGVERFLEGLDFNPGDLEDCEERLFAIRALARKHDVQPDDLA
DHADVLREKLQALDAGDQNLADQEDALRAAEATYAAAAERLSAKRRDSAATLDAAVMAELAPLKMERAVFETKITEAEPG
PDGVDEVAFTVATNPGAPAGPLNKIASGGELSRFLLALKVCLRGEDAAKTLIFDEIDRGVGGATADAVGRRLKALADGSQ
VLVVTHSPQVAAQGAHHWRVQKSVTEGVTLSQVVPLNEGERVDEIARMVSGDKITPEARAAAKALLADV
>Mature_549_residues
MLRALDIRDLLIIDHLELSFQPGLNVLTGETGAGKSILLDSLGFVLGWRGRAALVRQGADQGEVVAEFDLPEGHAARAVL
EEAGLPVSDTLLLRRVNTSDGRKTAWVNDRRCSGEVLRALSDTLLELHGQHDDRGLLNPRGHRAMLDDFANVQAQLDEVR
AAWGAAARARKQVEETRAALESVRAEEEFLRHSVSELDKLSPEPGEDESLDTRRRQMQAAERIRGDIARAHGLLSEGAEG
AMGEAQRWLEAVSGDAGEALDAPLAALSRAMIELGEAQDGVERFLEGLDFNPGDLEDCEERLFAIRALARKHDVQPDDLA
DHADVLREKLQALDAGDQNLADQEDALRAAEATYAAAAERLSAKRRDSAATLDAAVMAELAPLKMERAVFETKITEAEPG
PDGVDEVAFTVATNPGAPAGPLNKIASGGELSRFLLALKVCLRGEDAAKTLIFDEIDRGVGGATADAVGRRLKALADGSQ
VLVVTHSPQVAAQGAHHWRVQKSVTEGVTLSQVVPLNEGERVDEIARMVSGDKITPEARAAAKALLADV

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=563, Percent_Identity=36.056838365897, Blast_Score=298, Evalue=5e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 58941; Mature: 58941

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRALDIRDLLIIDHLELSFQPGLNVLTGETGAGKSILLDSLGFVLGWRGRAALVRQGAD
CCCCCCHHHHHHHHHHHEECCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
QGEVVAEFDLPEGHAARAVLEEAGLPVSDTLLLRRVNTSDGRKTAWVNDRRCSGEVLRAL
CCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHEECCCCCCCEEECCCCCCCHHHHHHHH
SDTLLELHGQHDDRGLLNPRGHRAMLDDFANVQAQLDEVRAAWGAAARARKQVEETRAAL
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESVRAEEEFLRHSVSELDKLSPEPGEDESLDTRRRQMQAAERIRGDIARAHGLLSEGAEG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AMGEAQRWLEAVSGDAGEALDAPLAALSRAMIELGEAQDGVERFLEGLDFNPGDLEDCEE
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHH
RLFAIRALARKHDVQPDDLADHADVLREKLQALDAGDQNLADQEDALRAAEATYAAAAER
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
LSAKRRDSAATLDAAVMAELAPLKMERAVFETKITEAEPGPDGVDEVAFTVATNPGAPAG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCCCC
PLNKIASGGELSRFLLALKVCLRGEDAAKTLIFDEIDRGVGGATADAVGRRLKALADGSQ
CHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCE
VLVVTHSPQVAAQGAHHWRVQKSVTEGVTLSQVVPLNEGERVDEIARMVSGDKITPEARA
EEEEECCCCHHHCCCHHHHHHHHHHCCCCHHHEECCCCCCHHHHHHHHHCCCCCCHHHHH
AAKALLADV
HHHHHHHCC
>Mature Secondary Structure
MLRALDIRDLLIIDHLELSFQPGLNVLTGETGAGKSILLDSLGFVLGWRGRAALVRQGAD
CCCCCCHHHHHHHHHHHEECCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
QGEVVAEFDLPEGHAARAVLEEAGLPVSDTLLLRRVNTSDGRKTAWVNDRRCSGEVLRAL
CCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHEECCCCCCCEEECCCCCCCHHHHHHHH
SDTLLELHGQHDDRGLLNPRGHRAMLDDFANVQAQLDEVRAAWGAAARARKQVEETRAAL
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESVRAEEEFLRHSVSELDKLSPEPGEDESLDTRRRQMQAAERIRGDIARAHGLLSEGAEG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AMGEAQRWLEAVSGDAGEALDAPLAALSRAMIELGEAQDGVERFLEGLDFNPGDLEDCEE
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHH
RLFAIRALARKHDVQPDDLADHADVLREKLQALDAGDQNLADQEDALRAAEATYAAAAER
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
LSAKRRDSAATLDAAVMAELAPLKMERAVFETKITEAEPGPDGVDEVAFTVATNPGAPAG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCCCC
PLNKIASGGELSRFLLALKVCLRGEDAAKTLIFDEIDRGVGGATADAVGRRLKALADGSQ
CHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCE
VLVVTHSPQVAAQGAHHWRVQKSVTEGVTLSQVVPLNEGERVDEIARMVSGDKITPEARA
EEEEECCCCHHHCCCHHHHHHHHHHCCCCHHHEECCCCCCHHHHHHHHHCCCCCCHHHHH
AAKALLADV
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA